Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00662 ATGGCCACTCTTCCGCTCCTCCGCCCAAGCTGCTTCCTTCCCACTCCCACCCTCAAACCCTCATTCCCCAGACACACACCCCTTCTCCCTCTCAAACTAAAAAACGGCGCCGTCGGGGCGCGCTTGTCGAACTCCTCTTCTCCTCCGCCGACGGAGCGCCTCATCTCCATCGCCGCCTACACTCTCCCGTTCTTCAACTCCCTCCAGTACGGTCGATACCTCCTGGCGCAGTACCCTAAGCTCGCCGTCCTCTTCGATCCCATCGTCCCCTTTCTCGCCTTCTACAGATCGATCCCCTACGCTTCCTTCGTCGCCTTCTTCGCCCTCTACCTCGGCGTCGTGCGAAACCCTACCTTCCCCCGCTACGTCAGGTTCAACGCCATGCAAGCCGTCACCCTCGACGTTCTCCTCGTTATTCCTCACCTCATCGCGCGAATCTTCTCCCCTGGTCGCGGCCCTCTCATGATTTGGTCCAGCAACGCAATTTTCGTCTTCAGCATTTTCTGCTTCCTCTACGGCGTCGCTTCGTGTGTCTTGGGACGCACGCCGTATTTGCCCTTTGTCGCCGATGCTGCTTCCAGGCAAATCTGA 591 0.5888 MATLPLLRPSCFLPTPTLKPSFPRHTPLLPLKLKNGAVGARLSNSSSPPPTERLISIAAYTLPFFNSLQYGRYLLAQYPKLAVLFDPIVPFLAFYRSIPYASFVAFFALYLGVVRNPTFPRYVRFNAMQAVTLDVLLVIPHLIARIFSPGRGPLMIWSSNAIFVFSIFCFLYGVASCVLGRTPYLPFVADAASRQI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00662 196 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 15 196 IPR005691 -
Vimu6g00662 196 Pfam Chloroplast import apparatus Tic20-like 51 192 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00662 Vimu-Chr6 7761242 7769367 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00662 - - vra:106779574 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00662 6 7761242 7769367 Vimu6g00662 6 7761242 7769367 ECH