Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00660 ATGGCTTATGCTGGCGGGGTTTGGATTTTGCCGTTGGTCGCCGCCTGGTGGTGGCTGTCCACGGCGGCGACGGTGAGGGGTTCAAATTCGACGACGATTTACGACGAGCTTCGGGCGCAGGGTCTTCCGGAGGGGCTTCTTCCGAAGGGAATTGCGAAGTACTCGTTGAACGGAACAAGTGGGGAATTCGAGGTGTGGATGCCGGAACCCTGCAACGCCAAGTTTGAGAACGAGGTGCACTACGATTCCAACATAAAGGGTATCCTCGGATTCGGTCGGATCGGGAAATTGTCCGGTATGTCGGCGCAAGAGCTCTTTTTGTGGTTCCCTGTTAAGGGCATTCGTGTGGATGTTCCCACCTCTGGTCTTATACACTTTGATGTCGGTGTTGCGGATAAGCAGTTATCTCTGTCCCTTTTTGAAGACCCTCCTGATTGTAGCCCTGAGGTTCGTTTATCATCCTTCAATGTTCTAACCCCTTTTTTTGATTTGGGGTTTTTTCCTCCTTTGGGGATCTGA 519 0.5202 MAYAGGVWILPLVAAWWWLSTAATVRGSNSTTIYDELRAQGLPEGLLPKGIAKYSLNGTSGEFEVWMPEPCNAKFENEVHYDSNIKGILGFGRIGKLSGMSAQELFLWFPVKGIRVDVPTSGLIHFDVGVADKQLSLSLFEDPPDCSPEVRLSSFNVLTPFFDLGFFPPLGI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00660 172 SUPERFAMILY At5g01610-like 12 147 IPR036758 -
Vimu6g00660 172 Pfam Protein of unknown function, DUF538 34 141 IPR007493 -
Vimu6g00660 172 Gene3D - 17 149 IPR036758 -
Vimu6g00660 172 PANTHER T31J12.3 PROTEIN-RELATED 24 146 IPR007493 -
Vimu6g00660 172 FunFam Uncharacterized protein At3g07460 19 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00660 Vimu-Chr6 7751018 7751536 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00660 - - gmx:100793358 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00660 6 7751018 7751536 Vimu6g00660 6 7751018 7751536 ECH