Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00658 GAGTTCTTTCCCCTTTGCCATTGGAACTCCCAGCAAGCACCAATGGCTCTGAATGTTTGTGTTTCTCCTAACCCTAAATGGGTTGCATCTCCTTCCTTAGACAGTGGTTCTTCTTTGAGACCTTCACTTGGGTCTTGTTTTGGTAACATAAACATTCTTAGTGTGAATCTCAACTTGAGTACTAGAACCACGAGTTTGAGTTTGAGAAGAAGTTTTAGTGTAAGATCTAGTTTGGAAACTGCAGGGCCCACAGTCACAGTGGGACAAGTCACTGAGGTAAACAAGGACACCTTCTGGCCGATTGTTAAGGCTGCCGGGGATAAAACCGTTGTCCTAGACATGTACACCCAATGCACTGTCCATAATCAATTGCAGATCAGGCTTAGATTCCCTCATAATTTATCTTTGAGCAATTTGCACAGTATTGTATTTACCTTAGTGGGGATGGTTCAAGATGAACCTCAACCAAGGTGTGGCCCTTGCAAAGTGATGGCTCCAAAGTTTCAAGAATTATCTAAGAATTATGAGGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAACAGGCCATTGGCAAAAGAGCTGGGGATTAAAGTGGTTCCCACTTTTAAAATTCTGAAGGACAACAAGGTTGTAAAAGAAGTTACTGGAGCTAAATACGATGATTTGGTTGCTGCCATTGACAATGTTCGATTGAGCTAA 705 0.4199 EFFPLCHWNSQQAPMALNVCVSPNPKWVASPSLDSGSSLRPSLGSCFGNINILSVNLNLSTRTTSLSLRRSFSVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQCTVHNQLQIRLRFPHNLSLSNLHSIVFTLVGMVQDEPQPRCGPCKVMAPKFQELSKNYEDVVFLKLDCNQDNRPLAKELGIKVVPTFKILKDNKVVKEVTGAKYDDLVAAIDNVRLS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00658 234 Gene3D Glutaredoxin 74 233 - -
Vimu6g00658 234 SUPERFAMILY Thioredoxin-like 156 231 IPR036249 -
Vimu6g00658 234 CDD TRX_family 156 229 - -
Vimu6g00658 234 PANTHER THIOREDOXIN 94 229 - -
Vimu6g00658 234 ProSiteProfiles Thioredoxin domain profile. 103 233 IPR013766 -
Vimu6g00658 234 Pfam Thioredoxin 156 229 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00658 Vimu-Chr6 7723980 7726430 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00658 K03671 - gmx:100499776 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00658 6 7723980 7726430 Vimu6g00658 6 7723980 7726430 ECH