Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00640 ATGAGAGCACAGAAACAGAAGAATAAGGCAAAGCCATTCAGCGGCACAGAGAATAGTATAGTGATTGGAAGAGATGACCTGACGTCGAGATTGGCCACACCTCCGGCGATAAACAGCGGTAAAGGAAGGGGAGAATCATCGCATCGCGTTGCCCTCACCAGGAATGCTTTTGCTTCCAAGTTCGAATCGCCGATGATGGCTATGGAGTGTCGGACCGTCCTGTCGCTGGGATTGAGCTTCACGGTGGCTGTCGTCTCCTCCACTCAACTCGAATGTCGCGGCCTCGATCCAATCAAGCACCACACTTGTTCCGTGCAGTTCAATGGTGTGAGTTCACACTCGCGGTGGCCAGCGTCGAAGGAGAGCGGCTGTTTTGATATGCATATCAACCAATGGGATAAGAGGGGGTTCAAGAACCACAAGCTTGATCTTTCAGTGAGAGATGAAAGTACTTTAGCCATTTCAGTTGTTCAATTGAGACAGTCTGTTTGTACAAACTCTCTCATAATGGCAGCTTCTTCTTCTCCAATGGCAATCCAACTTAAGTCCACCTTCACTAGGACTCTTGTCTCACCCAAGGGTCTCTCTTCCTCTTCTCCACTTCCCTTATTCCCTTCTAGAAGACACTCCACCTTCACTGTTAAGGCCATCCAATCAGACAAGCCCACCTATCAAGTCATTCAGCCCATCAACGGTGACCCATTCATCGGAAGTCTCGAAACGCCGGTAACATCCAGCCCTTTGATCGCCTGGTACCTCTCCAACCTCCCTGCTTACAGGACCGCAGTCAGCCCACTCCTCAGAGGCATCGAAGTGGGCCTGGCCCACGGATACCTCCTCGTCGGCCCATTCGTCAAGGCCGGCCCTCTCAGGAACACCGAGTACGCGGGCGCAGCGGGCTCTCTCGCTGCCGGTGGCCTTGTGGCGATCCTGAGCATCTGCCTCACAATCTACGGGATCTCATCGTTCAACGAGGGAGACGCATCCACCGCCCCTTCCCTGACCTTAACGGGCCGCAAGAAGCAGCCCGATCAGCTCCAGACCGCCGATGGATGGGCCAAGTTCACCGGGGGCTTCTTCTTCGGAGGCATTTCGGGTGTTATTTGGGCCTACTTTCTCCTCTACGTCTTGGACCTTCCTTACTACATCAAGTGA 1155 0.5342 MRAQKQKNKAKPFSGTENSIVIGRDDLTSRLATPPAINSGKGRGESSHRVALTRNAFASKFESPMMAMECRTVLSLGLSFTVAVVSSTQLECRGLDPIKHHTCSVQFNGVSSHSRWPASKESGCFDMHINQWDKRGFKNHKLDLSVRDESTLAISVVQLRQSVCTNSLIMAASSSPMAIQLKSTFTRTLVSPKGLSSSSPLPLFPSRRHSTFTVKAIQSDKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFVKAGPLRNTEYAGAAGSLAAGGLVAILSICLTIYGISSFNEGDASTAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYIK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00640 384 Gene3D Photosystem I PsaL, reaction centre subunit XI 221 384 IPR036592 GO:0009522|GO:0009538|GO:0015979
Vimu6g00640 384 Pfam Photosystem I reaction centre subunit XI 226 378 IPR003757 GO:0009522|GO:0009538|GO:0015979
Vimu6g00640 384 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC 170 384 IPR022980 -
Vimu6g00640 384 FunFam Photosystem I reaction center subunit XI 221 384 - -
Vimu6g00640 384 SUPERFAMILY Photosystem I reaction center subunit XI, PsaL 227 383 IPR036592 GO:0009522|GO:0009538|GO:0015979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00640 K02699 - gmx:100500317 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00640 6 7536551 7543518 Vimu6g00640 6 7536551 7543518 ECH