Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00639 ATGAGACAAAGAATGGAAAGGCTTGTGATTCTTCCTTTCTCAGCTGGTTGCATCTCTGAGGCCAGTGTTGCTGTTGGTGTTCATCACCCGAGAAGATCAAAACCATACACCAATCCATCACCTCCTTCAATAAGTCTCTCTCTCTCTCTCTCTCTCAATTTATTTACTATTTTTTATTTCTCCATTCTCATCATTCAAAACTCTCTCTCTATGATGGAGATTCAAATTTTAATTTTTAATTTGGAGTCAGAATTATTTGAATTGATTGTATCTGATTATCCGGTTGGTATAATTATACGGCACGAGACAGAAGGAGGAAAAGGTGTTGAGGATTCAGACATGAAGAACTCGTTGAAGGTGGTAGACGTTCTTCCAAAGCCTAACCTATCGAATGGCTTCAACAGACTGTTCAAGGGTTTCAAGAATTTCTCTCAATTGTTCGTGGAGAAAGACGAGTACGAAGAGGAGGAGATAGACATGGAAATAGGTTGTCCAACAGATGTGCAGCACGTGACACACATCGGTTGGGATGGCATTGCAACTTCTAATGATCCTCTCATTCCTCCACAACTCCTCTCTCTATCATCTCAATCAAAACTTCAAACATCATCGTCATCTCCTAATTAG 627 0.4003 MRQRMERLVILPFSAGCISEASVAVGVHHPRRSKPYTNPSPPSISLSLSLSLNLFTIFYFSILIIQNSLSMMEIQILIFNLESELFELIVSDYPVGIIIRHETEGGKGVEDSDMKNSLKVVDVLPKPNLSNGFNRLFKGFKNFSQLFVEKDEYEEEEIDMEIGCPTDVQHVTHIGWDGIATSNDPLIPPQLLSLSSQSKLQTSSSSPN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00639 208 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC2 1 195 IPR044509 -
Vimu6g00639 208 Pfam P21-Rho-binding domain 161 180 IPR000095 -
Vimu6g00639 208 SMART PBD_5 162 198 IPR000095 -
Vimu6g00639 208 Gene3D CRIB domain 159 205 IPR036936 -
Vimu6g00639 208 ProSiteProfiles CRIB domain profile. 162 175 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00639 Vimu-Chr6 7534958 7536086 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00639 - - gmx:100306617 122.864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00639 6 7534958 7536086 Vimu6g00639 6 7534958 7536086 ECH