Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00627 ATGGCGTCGGTGTTTCTGTACCACGTGGTCGGCGATCTGACGGTGGGGAAGCCGGAGCTGGTGGAGTTTTACGAGAGTGAGACGGTGGAGTCCGCGATTAGGGCGATCGGAGAGTTCCCTGAAGGGAGCATACCCATTTGGAAAAAGAGATCTCATGTGGGGATTGAGAATAGTGAGATGAAGCAGCAGAGGTTTGTTGGAATCTTTAGTTCCTTCGACATAGTTGCGTTTTTGGCTAAGAGTGAGTGTTTGGAGGATCAGGACAAGGCCTTGAAAGTTCCTGTTTCTGAGGTTGTTGTTCCTAACAATTCGCTGCTCAGGGTTGTTGACCCTGCCACAAGATTAATAGATGCACTAGACATGATGAAACAAGGTGTGAAACGTTTGCTTGTTCCGAAGAGTGTAGCATGGAAGGGCATGAGTAAGCGATTCTCAGCTATCTACTACGGCAAATGGCACAAGAATAATGATTCTCCTACCAACAGCAGCAACAATCTACCTCCTAACATGAATTGGAGCCCCTCAACTTCCGGCACCGTTATCCGCGACAAGTACTGTTGTCTCTCTAGAGAAGATGTTCTTCGTTTCATCATTGGTTGTCTTGGTGCTCTGGCACCCCTTCCTCTCACTTCCATTTCTGCTCTTGGAGCAATCAATGCAGACTACAGCTATATCGAATCCTCCGCTCCAGCCATTGCAGCCACTAAAAAGCTTCCTCAAGATCCAAGTGCAGTTGCTGTGATAGAAAACACACCAGATGGTCAGTGTAAGATCCTTGGAGAAATTTCTGCATGCAAGTTATGGAAATGCGATTACTTAGCAGCAGCATGGGCTCTGGCGAATCTCTCGGCCGGACAGTTTGTCATGGGAGTCGAAGACAATGTCAGCTCAAGATCACTACCCGAGTTCAGTGTAGATTCACCAACAGGAAACAGTGATTTAGTTAATGGTTCGAGAAAACCAAGGAAATTCAGTAGCAGGAGTATTGGGTTCTTCAGCAATTCTCACAGTTTTGGTTCCAGGAGCATGTACAGAGGTAGAAGTGCACCTCTGACATGTAAATTCACCAGTTCACTTGCTGCAGTTTTGGCTCAGATGCTTTCCCACAGGGCAACTCATGTTTGGGTGACCGAGGACGACAACGACGATGTTTTGGTCGGTGTGGTTGGATATACTGATATTTTAGCTGCTGTAACCAAACCCCCTACAACCATGATTCCTGTTAATAGATCTACAGAGGGGTTTGGAAATGAAATTCAGTGTTGA 1266 0.466 MASVFLYHVVGDLTVGKPELVEFYESETVESAIRAIGEFPEGSIPIWKKRSHVGIENSEMKQQRFVGIFSSFDIVAFLAKSECLEDQDKALKVPVSEVVVPNNSLLRVVDPATRLIDALDMMKQGVKRLLVPKSVAWKGMSKRFSAIYYGKWHKNNDSPTNSSNNLPPNMNWSPSTSGTVIRDKYCCLSREDVLRFIIGCLGALAPLPLTSISALGAINADYSYIESSAPAIAATKKLPQDPSAVAVIENTPDGQCKILGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVSSRSLPEFSVDSPTGNSDLVNGSRKPRKFSSRSIGFFSNSHSFGSRSMYRGRSAPLTCKFTSSLAAVLAQMLSHRATHVWVTEDDNDDVLVGVVGYTDILAAVTKPPTTMIPVNRSTEGFGNEIQC 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00627 421 SMART cbs_1 349 399 IPR000644 -
Vimu6g00627 421 SMART cbs_1 19 79 IPR000644 -
Vimu6g00627 421 SUPERFAMILY CBS-domain pair 5 131 IPR046342 -
Vimu6g00627 421 SUPERFAMILY CBS-domain pair 349 401 IPR046342 -
Vimu6g00627 421 ProSiteProfiles CBS domain profile. 343 405 IPR000644 -
Vimu6g00627 421 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 402 - -
Vimu6g00627 421 CDD CBS_pair_SF 23 131 - -
Vimu6g00627 421 Pfam CBS domain 349 398 IPR000644 -
Vimu6g00627 421 Gene3D - 331 400 IPR046342 -
Vimu6g00627 421 Gene3D - 5 134 IPR046342 -
Vimu6g00627 421 MobiDBLite consensus disorder prediction 300 321 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00627 - - gmx:100784349 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00627 6 7434001 7436908 Vimu6g00627 6 7434001 7436908 ECH