Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00620 ATGGCGACCGCGGCGGTGCTCTTTTGTCGCCTCCGCCAAGCGCGGCCATCCTCCTCCCTCTCCCTCCTATATCTGCCTCGTGTCCTATCCTCTCAGCGACCGTCTCCTCTCCCCGCTTCCGCCCTACCTTCCTCCCCAACCCTGGCATTTTTCGACGCGTTCCACTCACGCGCTTTCTCCACTCGCTCTTCCGATGAGCGCGAATTGGGGTTGAACTCGTTCGGTGTCGAGTCGCAGGTTAACTCTGAGATTCTGAAAGCGATCGCCGATACCAGTGGTAGCGGTGAAGAAGACGCCGGTTTCCCCGTTCGCGTGCTGATTTCGATGTTCGACTCGTTCCACGAGCTTTCTGGATTTCCGTGGTGGTTAACTATAGTTTCTTCTACTCTAGCTCTCAGAATTGCTATTCTTTTTCCTCTGGTTTTAACACTTCACAAGCTGAAAACGATTGGAGAGTTTTTCCCTAAATGTGAGTATCTCGTGTTTCGGTATGCCTCCTCCATTCCCACCACCTTTCTCAGGAAAGAGTTATATTCGTCAGTTTCTATTGTTCCAGAAGAAGAGAAAAGCGAGTGGATGCCCCTCTTATGTCTGGCCACTGGTACCATTCATTGTACAGAGAGGGCATCCACGACCTGCTGGAATCTGAAACCTGTCAAAGAGAAAAGCTTGGTTGGAGGGGAAGCTGTCCAATTCCAAGGACAGGCCATGCCGAACCTGGCTGGAAAATTACAGGCTGTTGGACAAACCCCCATTGGCAACTATTTGTTGACTTTTGTTCCGTGCTTTTTCCTGTGGATGATTAGCATAAGGAAGATGTCACTGAATGGTCACCCTGGTTTTGATTGCGGTGGTGCTTTATGGTTCCAGAATTTAACTGAACTCTCTCACGGTTATTCGGGGTTCATCTTTCCTTTCCTGATTGCTGGTTTGCACTACATCAATGTCCAGATATCCTTTGGGAAACCTGTGGTTGCAGAGGCAAGGAATATTTTTGAGTTATTAGCCAAATATTACAAGCGGTACTTGGATTTTCTAACAGTGCCTTTAGCTTTTGTGGGCTTTTGCATTCCTCAGGGGAGCCAGCTCTATTGGGTTACCAATAGTTCATTTACCCTCATTCAGCAAATAACCCTGAGACATCCTGCTGTCCTTGCAATGTTAGGGTTGCAAGACAAGAATAGTCAAAAGGTAGCTATTGAGAAAATTGGTGCTTCTAAAACGGCTCCTTCACCAGGGATACAAGATAATATTCCTATAGAAGCTTTTTCTGCAGAAAAAAGTTCTCTGAATTCACCTGAAAAGTGGCATAGAATACCTATTGAGGAGATGTCCCCTAAAGAACTGACTGCTCTTGCAGTCCCATTTCTATCCAGTAATGATAAAGAAAGTGCAATTCCCTTACTAAAATTAGCCCTTGATAAGGATCCTGAATATGTTCGAGCTTTAGTTTTGATGGGACGGATTCTATTGCTGAGGCATGCAAATGAGGAGGCTATTGAGTACTTTGAGTGTGCAATTTCAAAACTTTCTTTTGCTGGATATCCAACTGATGCGGAAGAACTGGACCTTTTGATTCTTTCATCCCAGTGGGCTGGAGTTGCTTGTGAACGACAGGGTAAGAGGAACGAAGGACGGACACACTTCGAAAGAATAGCAAATATGGAGGAGCCAGAAGATCCTACAAGCAAAGGCTATTATTTTGATGGGTTACTGTTGCTTGCCAGCACTCTATTTGATGCGGGCCAGAAGGCCGAAGCTGCGAAGTACCTACGTCTTGTTGTTGTTCATAAACCTGCTTATAAAAAATTCTTGGACCAGTGTGAACAAGATGATGATATTGCCAGCGATCTTGCCAGTAGAAGAGATTACTAA 1875 0.4581 MATAAVLFCRLRQARPSSSLSLLYLPRVLSSQRPSPLPASALPSSPTLAFFDAFHSRAFSTRSSDERELGLNSFGVESQVNSEILKAIADTSGSGEEDAGFPVRVLISMFDSFHELSGFPWWLTIVSSTLALRIAILFPLVLTLHKLKTIGEFFPKCEYLVFRYASSIPTTFLRKELYSSVSIVPEEEKSEWMPLLCLATGTIHCTERASTTCWNLKPVKEKSLVGGEAVQFQGQAMPNLAGKLQAVGQTPIGNYLLTFVPCFFLWMISIRKMSLNGHPGFDCGGALWFQNLTELSHGYSGFIFPFLIAGLHYINVQISFGKPVVAEARNIFELLAKYYKRYLDFLTVPLAFVGFCIPQGSQLYWVTNSSFTLIQQITLRHPAVLAMLGLQDKNSQKVAIEKIGASKTAPSPGIQDNIPIEAFSAEKSSLNSPEKWHRIPIEEMSPKELTALAVPFLSSNDKESAIPLLKLALDKDPEYVRALVLMGRILLLRHANEEAIEYFECAISKLSFAGYPTDAEELDLLILSSQWAGVACERQGKRNEGRTHFERIANMEEPEDPTSKGYYFDGLLLLASTLFDAGQKAEAAKYLRLVVVHKPAYKKFLDQCEQDDDIASDLASRRDY 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00620 624 CDD 5TM_Oxa1-like 118 382 - -
Vimu6g00620 624 PANTHER OXA1 88 397 IPR001708 GO:0016020|GO:0032977
Vimu6g00620 624 SMART tpr_5 446 479 IPR019734 GO:0005515
Vimu6g00620 624 SMART tpr_5 568 601 IPR019734 GO:0005515
Vimu6g00620 624 SMART tpr_5 480 513 IPR019734 GO:0005515
Vimu6g00620 624 Gene3D Tetratricopeptide repeat domain 432 620 IPR011990 GO:0005515
Vimu6g00620 624 SUPERFAMILY TPR-like 448 601 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00620 - - gmx:100797573 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00620 6 7371346 7379170 Vimu6g00620 6 7371346 7379170 ECH