Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00619 ATGAGAACAAAACCACCGCCATCGCTCTTATCCCTCACCATTGACTCGGCCGTCCTCAATCTATCCGACATCTCCGATCTCTCCTCAATCCCTGATCACATCCTCCTCGACCTCTTCCTGAGAATATTAAGAGCTGGGAAACTGACTGAGAAAGTTCTGAGACTGTTCATAGCGACTGGTAAGGATGAAGTAATTTCCCTTGTTGAGGCACTCAATATCCGACATGTTCTGACCCCTGTGCTTCCCACCATACAGGGTGTTCTGAAAAATTCTGAAATGTCTCAAGCAGTTATCAACGATAATGAAGTGGATATTGTGATTGGTGCATTGCACGCTGACCTTACAACTTTCATGAATGAATGGAAGCCAATTTTCTCCCGCTTTCACCTGATAATAGTAAAAGATCCTGACCTCAAAGAAGAACTACAAATTCCTGAAGGATTCAGGGCAGATGTGTATTCAAAGGCTGATATTGAGCGAGTGGTGGGTTCTTCCTCTTCTATTCGCTTCTCTGGCTACTCTTGTAGATATTTTGGCTTTCTAATTTCACGGAAAAAGTATGTTGTCTGTATTGATGATGATTGTGTTCCTGCAAAAGATAATGCGGGGTATTTGGTGGATGCTGTGGCTCAGCATGTTTCGAACCTCCAGACTCCTGCCACCCCTTTCTTCTTCAATACACTATATGATCCATTCCGAAAGGGTGCAGATTTTGTTCGTGGTTACCCATTTAGCCTGCGAGAAGGAGTTAATTGTGCTGTGTCATGTGGGCTATGGCTCAATATGGCCGACCTTGATGCTCCAACACAAGCTCTGAAGCCACGACAGAAGAATGTGCGATATGTAGATGCAGTTTTGACTGTTCCTGCAAGAGCCTTGTTGCCAATGAGTGGAATCAATGTTGCCTTTAACCGTGAAGCTATTGGTCCAGCCATAGGCCCGGCATTGAGGTTGACAGGGGAAGGGAAACTGAGGTGGGAAACTGTGGAAGACATATGGTGTGGAATGTGTGTGAAAGTGATCTGTGACCACCTAGGCCTTGGTGTGAAAACTGGGTTACCCTATGTCTGGAGAACAGAAAGGGGTGATGCAGTTCAGAGCTTGAAGAAAGAGTGGGAAGGGGTGAAATTGATGGAGGATGTTGTTCCTTTCTTTCAGTCATTGAAGTTGCCACAATCAGCAACTACAGCAGAGGTTTGTATGGTTGAGATTGCCAAAGCAGTGAAGGAACAACTAGGGAAGGCTCATCCTGTGTTTTCTCAGGCTGCTGAAACCATGGTAGAGTGGGTCAAGCTCTGGAAGACTGTTGCATCTGGTTGA 1320 0.4553 MRTKPPPSLLSLTIDSAVLNLSDISDLSSIPDHILLDLFLRILRAGKLTEKVLRLFIATGKDEVISLVEALNIRHVLTPVLPTIQGVLKNSEMSQAVINDNEVDIVIGALHADLTTFMNEWKPIFSRFHLIIVKDPDLKEELQIPEGFRADVYSKADIERVVGSSSSIRFSGYSCRYFGFLISRKKYVVCIDDDCVPAKDNAGYLVDAVAQHVSNLQTPATPFFFNTLYDPFRKGADFVRGYPFSLREGVNCAVSCGLWLNMADLDAPTQALKPRQKNVRYVDAVLTVPARALLPMSGINVAFNREAIGPAIGPALRLTGEGKLRWETVEDIWCGMCVKVICDHLGLGVKTGLPYVWRTERGDAVQSLKKEWEGVKLMEDVVPFFQSLKLPQSATTAEVCMVEIAKAVKEQLGKAHPVFSQAAETMVEWVKLWKTVASG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00619 439 PANTHER UDP-ARABINOSE MUTASE 95 436 IPR037595 -
Vimu6g00619 439 Pfam Reversibly glycosylated polypeptide 98 437 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00619 Vimu-Chr6 7358262 7360581 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00619 K13379 - cave:132170682 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00619 6 7358262 7360581 Vimu6g00619 6 7358262 7360581 ECH