Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00617 ATGGCGAAGGAGAACGTTCTCCACCGCGCGACCTCTTCCTCCAGTGACATATCAGTCTGTTTGGACACAGACGCCACTTCCGCTCCCGCCTCCGCCGGGCCTGTTCACAGGAATCCATCCTATGCGGAACAGAACACTCCTGCGCCTACACCTGCACCGGTTAACGGTGATAATGATCTTACGAGAGTTAGGAGCAAGGGAAGCAGTGCAGTGGCGCTTGCTAAGTTCCTTGACGCGAAAGTACCCTTCAGGGAAAAGGTGCAATGGATAAAACGGGCTTCCGTACTTAAGGCTGATGGTACAGTTGAAATTAAAGTTCCAGGAGTAGGAAGTAGTATTCATGAGCATCATCATGTTAAATGTGATGAACCTCATGATGAATTTTGGGATGCAATACACAATCAGAATATTCGATCTATCAAGCCACTTCAAATTGTAATGCTTATAGTGGGCACACGAGGAGATGTCCAGCCATTTATTGCCATGGGGAAGCGTCTACAGGAAGATGGCCACAGGGTTAGACTAGCTACTCATAAGAACTTCGAGGATTTTGTCTTGAATGCAGGCTTGGAGTTTTACCCTTTGGGTGGAGATCCTAAAGTTCTTGCCGGTTATATGGTCAAGAATAAAGGCTTTTTGCCATCAGGACCTTCAGAAATACACACACAAAGAAATCAAATCAAGGAAATTATTAATTCTTTGCTTCCTGCATGCCACAGTCGTTACCCAGAGTATAATGCAACCTTTAAAGCAGAAGCGATAATTGCTAATCCTCCAGCATACGGGCATACACATGTTGCTGAATATCTAAAAGTTCCACTTCACGTATTCTTCACAATGCCATGGACGCCTACTAGTGAATTCCCTCATCCTCTTTCCCGTGTTAAGCAACCAATTGGCTACAGACTGTCATATCAAATAGTTGATGCTTTAATCTGGCTTGGAATACGAGACTTGATAAATGAGTTTAGGAAGAAAAAGTTGAAGCTAAAGCCTGTTACATATCTAAGTGGATCTTACACTCACCCTTTTGATGTGCCCCATGGTTATATGTGGAGTCCTCACTTAGTCCCTAAACCAAAAGACTGGGGACCTAAGATTGACGTTGTTGGGTTTTGTTTCCTTGACCTTGCTTCAACTTTTGACCCACCAAAATCGCTAGTAGATTGGCTTGAAGAAGGAGAAAAACCGATTTATGTTGGATTTGGTAGCCTTCCTTTACAAGAACCAGAGAAAATGACGAAAATTATAATCCAAGCTCTGGAAAAAACAGGACAGAGAGGTGTTATTAACAGAGGGTGGGGTGGTCTTGGATCTTTGGCAGAACGAAAGAAATCTGTGTATTTGTTGGACAACTGTCCGCATGATTGGCTGTTTCCCCGATGCACTGCTGTGATACATCACGGGGGTGCCGGAACAACTGCCGCTGGTCTTAGAGCTGAATGCCCAACAACCATTGTGCCATTCTTTGGCGACCAGCCATTTTGGGGAGAGCGGGTACATGCTAGAGGAGTAGGTCCTGCACCCATCCCGGTGGATGAGTTTACATTAGATAGGCTGGTCGATGCCATACACTTTATGCTGAAACCAGAGGTGAAAAGGCGTGCTGTTGAACTTGCTAATTCCATGAAAAATGAAGATGGGGTGCTAGGAGCGGTTAAAGCTTTCTATAAACATTATCCGGACCAAAAATTGAAGTGTGAAGAGGCCAAGGCTTTAGCCGCCATAACTAAACCCAAGCCCATTCATAAATATTTCTCTTTACGAGGATGTTTAGGTTGCTCTACATCTTCTGTGGATACACATCGACCATAA 1815 0.4452 MAKENVLHRATSSSSDISVCLDTDATSAPASAGPVHRNPSYAEQNTPAPTPAPVNGDNDLTRVRSKGSSAVALAKFLDAKVPFREKVQWIKRASVLKADGTVEIKVPGVGSSIHEHHHVKCDEPHDEFWDAIHNQNIRSIKPLQIVMLIVGTRGDVQPFIAMGKRLQEDGHRVRLATHKNFEDFVLNAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIHTQRNQIKEIINSLLPACHSRYPEYNATFKAEAIIANPPAYGHTHVAEYLKVPLHVFFTMPWTPTSEFPHPLSRVKQPIGYRLSYQIVDALIWLGIRDLINEFRKKKLKLKPVTYLSGSYTHPFDVPHGYMWSPHLVPKPKDWGPKIDVVGFCFLDLASTFDPPKSLVDWLEEGEKPIYVGFGSLPLQEPEKMTKIIIQALEKTGQRGVINRGWGGLGSLAERKKSVYLLDNCPHDWLFPRCTAVIHHGGAGTTAAGLRAECPTTIVPFFGDQPFWGERVHARGVGPAPIPVDEFTLDRLVDAIHFMLKPEVKRRAVELANSMKNEDGVLGAVKAFYKHYPDQKLKCEEAKALAAITKPKPIHKYFSLRGCLGCSTSSVDTHRP 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00617 604 Gene3D Glycogen Phosphorylase B; 145 548 - -
Vimu6g00617 604 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 78 576 - -
Vimu6g00617 604 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 145 375 - -
Vimu6g00617 604 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 394 538 IPR002213 GO:0008194
Vimu6g00617 604 Gene3D Glycogen Phosphorylase B; 374 543 - -
Vimu6g00617 604 MobiDBLite consensus disorder prediction 26 57 - -
Vimu6g00617 604 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 145 558 - -
Vimu6g00617 604 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 376 543 - -
Vimu6g00617 604 Pfam Glycosyltransferase family 28 N-terminal domain 145 289 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vimu6g00617 604 CDD GT1_Gtf-like 145 559 IPR002213 GO:0008194
Vimu6g00617 604 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00617 Vimu-Chr6 7329798 7336030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00617 74 595 Glycosyltransferase AT3G07020 67.486 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00617 K05841 - gmx:100779695 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00617 6 7329798 7336030 Vimu6g00617 6 7329798 7336030 ECH