Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00615 ATGTTTGGGAACAAAGTGTTTCTAACTTATAAAAGAAGGCGTCAATCTCTAACTAGTAATTTTATCCATGGGAATTGTAACCAACATTCAGTGTGTGAAGATGCCCATAATGACAACCAAACTGTGGAGAAAACATCAGAAAAGCATGAAGAAAAGACGGATACTAGTGGTGGGAAAATGCCATGTTTCAAACAGCTGGATTATTCATCATTGCCTCTGCTTCAAAACACTGGTGATCCTAAGACAGGAGTGCTTGGAAACAATGATGCAACAGAAACAGTGGCTACTGCCCATGAATCATTTTCAACAGGGGATCCTTGCGAGGATAACATCAAGAAGGATGATGGTGAGTTGCCCATAGTAGAGAAGACTTCAGATAATGATTGCAATACTCAGAGAAATTCCTGTCCCGGTGAAAGCTCTTGTAATGGATGTGACAACTGTTCTAATAAAATTTCCCTGCCAGTTGAATTGGGTGCTGTCAATGATTTTAATTTAGCCAACTCAGAAACATTGATCACAAGGGATATCAGTTCTGCGCAAGTCAATACATCTACTGTTTCTAATATTTCAATGGATGATCCTACTGGTTGTCGCCCCAAAGGTAATATTGGAAACCCATCAGTAGATAGGGTTATTCGGGCCAACTTGACCAGTCCTCTAATAACCTTCAATCGATGCTATAAAAGAAAAAAGTGGTTGGATGGAAATGACAAGCAAAAGAGCTTATTGCACACGAAGGAAAACATTTCAGTGTTAACCAAGTGGAGTATGCTTGCAAATGGCAATCTATGTTCTAGTGATGAATCATCTAGCGAGGAATGTCCGGTAGATAATGTACCTGACCTTAATCAATCAGTGGAGCTTTCAGAAAGAGGGAAGACATTGAGTGAAACTCAATACGAAAAATCTTGTAGAAGTTGCTCTATGTCTTTCCTGACAGATCTTAATCAATCTGCTGAGCTTGTAGAAAGAGGGGAGCTTTGTCAACCTCAAGAAAAAGTCAAAAGTAGTGATTCTCTGTGTTCCCCTGGAGTTGTTTCTGAAACATGTATGACAGGCATGAGAAAGAAACTTTGTCATGGGGAAGACTCTGGAAAAAATGCCTCTCATACAGACAGAACAGGAGAACTGAGCCACAGTTGTCTGATTCACACGGAAGACCAACATCTTAATAAGGATTGTCAGGTAGTCTCTGTCAAAGTTGATTCTGAAGATCCCTATCCTGCACCCACAGGCACTAATCAGGAACTACAAAAGTCACAAACCACTTTGCGTGAGGTCAATGAACATGGTTTGGGCAATGAAATGATGAAAATTGCTGAATACCAACCTCAGTTTGACCTGCCTAACAACTCTGCGGAACAGCACATTGTTGATTTAAACATGGGTGCTGAGAAGCATCCCTTTCACTTGAGGATGAGAGCTCCTGCGTCCAAGTTGGAATCTGCATGCAGTAGTTCTGCCATTGCTGAAGATAAAGTTTCTGAACTGGACCTTTTAAATGCTAGAAATACACAGCTGATTTCAGAAGGAAAGACTACAGCCGTTGTTTGCTCAAGTAGTACTCAAACTCAGTTAATGATGACTGAAGAAAGAATGAGGGTTCAACAAACAAAAACCAATAAACAAAAATTGATGCCCATGATTTCTCTTTCTTTGGGCTTGTCTTTACCTATGGAGCTCAAGTCTAGAGTCAGTGATTCTGTTAATAGTATGTCAGTTTTGTCTTTGTCAAATTCAACCACTGAAACTATAGATATTGTCCAAGATGGACTATGTCGGTCTTCATCACCAAACTGGAAACTATCGCATCCCAGGAACCAGGTAGTACTCGACAACATTGTACACAGAACAAGAGCTTTAAATGAAAGAGGAAATTTTCAAGAATATTTGAAGCCACACCCTATCATGTGGTCTGAAGAGGAGCTGGATTTTCTTTGGATTGGTGTAAGGAGACATGGTAGGGGCAATTGGGATGCCATGTTAAGGGATCCTAGATTGCGGTTTTCGCCATCAAGGGTACCAGGGGACCTTGCTGAGAGGTGGGAGGCTGAACAATTAAAACTTTTGAACGATATCGATGTTGCACAGTTCATGTATCCAGCAGCAGAAAGGGCAGCAGCTGTGGCATCATGGCAAGGAAACTTTTGCCACTTGGATCCTAAACAAAGTTTCTGGGAGAGTAACCATTTGAAGAAACCTATTACCAGATATAACTTTCAAAGTAACACCACTGCGCACAGTCATAGGCCAACTACTCATTCCAGAAAGGCCAATTACAACAACAGAGACAAGTATGAACTAGGATTTTTCAACTCTCCTGGAAGTTTGAGCATTTGCAGGCAGAACTCTTACTCGAATGACTATCCCTTTAATTGTTTGGGTTCGACAAATAGTTTGCCCCACTGGCTCAGGGAAGCTGTTAACACTCCTCCAATCATGCCAAATATGTCTGCAGTGGGTTCCTTGAGTTCTCACCCAGACATTCCAGGAACTTCAGATCATTGCTTTAATACCAGCAAGTCATGCTTTGTACCCCAAAATTGGTTCCATGGTCTGAGGGCAAGTGAGCCACAAATGCCAAATGGTTCTTACTATTCAACCTATTCAAGAAGAAAATATGGGGTGGTGAAGATGAACAAGTCTCTGGAACCTCGTTTCCAGAAACCAGATGACTTGATCATTGTTGATAGTGACACTTCTTCTGAAGAGACCATATCTGATGATCATCGTGCCAGCTTGTAG 2748 0.4127 MFGNKVFLTYKRRRQSLTSNFIHGNCNQHSVCEDAHNDNQTVEKTSEKHEEKTDTSGGKMPCFKQLDYSSLPLLQNTGDPKTGVLGNNDATETVATAHESFSTGDPCEDNIKKDDGELPIVEKTSDNDCNTQRNSCPGESSCNGCDNCSNKISLPVELGAVNDFNLANSETLITRDISSAQVNTSTVSNISMDDPTGCRPKGNIGNPSVDRVIRANLTSPLITFNRCYKRKKWLDGNDKQKSLLHTKENISVLTKWSMLANGNLCSSDESSSEECPVDNVPDLNQSVELSERGKTLSETQYEKSCRSCSMSFLTDLNQSAELVERGELCQPQEKVKSSDSLCSPGVVSETCMTGMRKKLCHGEDSGKNASHTDRTGELSHSCLIHTEDQHLNKDCQVVSVKVDSEDPYPAPTGTNQELQKSQTTLREVNEHGLGNEMMKIAEYQPQFDLPNNSAEQHIVDLNMGAEKHPFHLRMRAPASKLESACSSSAIAEDKVSELDLLNARNTQLISEGKTTAVVCSSSTQTQLMMTEERMRVQQTKTNKQKLMPMISLSLGLSLPMELKSRVSDSVNSMSVLSLSNSTTETIDIVQDGLCRSSSPNWKLSHPRNQVVLDNIVHRTRALNERGNFQEYLKPHPIMWSEEELDFLWIGVRRHGRGNWDAMLRDPRLRFSPSRVPGDLAERWEAEQLKLLNDIDVAQFMYPAAERAAAVASWQGNFCHLDPKQSFWESNHLKKPITRYNFQSNTTAHSHRPTTHSRKANYNNRDKYELGFFNSPGSLSICRQNSYSNDYPFNCLGSTNSLPHWLREAVNTPPIMPNMSAVGSLSSHPDIPGTSDHCFNTSKSCFVPQNWFHGLRASEPQMPNGSYYSTYSRRKYGVVKMNKSLEPRFQKPDDLIIVDSDTSSEETISDDHRASL 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00615 915 ProSiteProfiles Myb-like domain profile. 639 687 IPR001005 -
Vimu6g00615 915 MobiDBLite consensus disorder prediction 40 57 - -
Vimu6g00615 915 CDD SANT_TRF 637 683 - -
Vimu6g00615 915 Gene3D - 638 687 - -
Vimu6g00615 915 MobiDBLite consensus disorder prediction 40 61 - -
Vimu6g00615 915 Coils Coil 32 52 - -
Vimu6g00615 915 SUPERFAMILY Homeodomain-like 636 684 IPR009057 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00615 - - vra:106759339 1785.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00615 6 7319685 7326294 Vimu6g00615 6 7319685 7326294 ECH