Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00308 ATGATGAGTGACCCAAATCCTGCGAGTAATATTCCTCAGTCTTCTCGAAGGTGTGTTGTTCGGCCGAGAAAGCCTCGGATTCTGCTTGGTGCTTGCGGATGCACTGATGCTTCAAAATTTGCTCTTCTTTGTCATATTTTTAGGAGATGGGCAAGCATAGAAGTTGTTATGACACGAGCCTCGATACCTTTTATTGAAGTTTCACAAACTCCCCGTCCAGTTTTTTTTAATCCTAGGAAAACTACTTCTCATCATCTGGAATGGGCTGATGTCTTTGTCATTGCTCCATTGTCTGCAAATACCCTTGCCAAGATTGCGCAAGGGATATCTGACAATTCTTTGACAGAAGTTGTGCGAGGTTGGGACTCTAACAAGCCATTTTATGTTGCACCTGCCATAGATCCTGTTACGTGGAATAATCCTTTGACAAAACAATATCGCAAAAGATGCGATGAACTTGGCATTAATATCATCGATCCCTCTCCACGGGGTGAAATGGCTGATCCTACTGAAATTTCTTACATTGTCAAAATCTCTAATGAAGAGATTTGGGACTAA 558 0.4194 MMSDPNPASNIPQSSRRCVVRPRKPRILLGACGCTDASKFALLCHIFRRWASIEVVMTRASIPFIEVSQTPRPVFFNPRKTTSHHLEWADVFVIAPLSANTLAKIAQGISDNSLTEVVRGWDSNKPFYVAPAIDPVTWNNPLTKQYRKRCDELGINIIDPSPRGEMADPTEISYIVKISNEEIWD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00308 185 Gene3D - 13 182 IPR036551 GO:0003824
Vimu6g00308 185 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 21 177 - -
Vimu6g00308 185 Pfam Flavoprotein 26 176 IPR003382 GO:0003824
Vimu6g00308 185 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 24 173 IPR036551 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00308 Vimu-Chr6 3738371 3739375 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00308 K01598 - gmx:100812130 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00308 6 3738371 3739375 Vimu9g00504 9 5976711 5981465 PCT