Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00307 ATGATGAGTGACCCAAATCCTGGGAGTAATATTCCACAGTCTTCTCAAAGTAATATTCCACAGTCTTCTCAAAGTAATATTCCACAGCCTTCTCAAAGTAATATTCCACAGTCTTCTCTAAGGTGTGCTGTTCAGCCGAGAAGGCCTCGGATTCTGCTTGGTGTTTGTGGGTGCACTGATGCTGCAAAATTTTCGCTTCTTTGTCATTTTTTTAGAAGATGGGCAAGCATAGAAGTTATTATGACACGAGCCTCGATACCTTTTATGGAAGTTTCACAAACTCCCCCTTCTCATCATCTGGAATGGGCTGATGTCTTTGTCATTGCTCCATTGTCTGCAAATACCCTTGCCAAGATTGCGCAAGGGATATCTGACAATTCTTTGACAGAAGTTGTGCGAGGTTGGGACCGTAACAAGCCATTTTACGATGCACCTGCCATAGACCCTGTTACTTGGAATAATCCTTTGACAAGACAATAA 480 0.425 MMSDPNPGSNIPQSSQSNIPQSSQSNIPQPSQSNIPQSSLRCAVQPRRPRILLGVCGCTDAAKFSLLCHFFRRWASIEVIMTRASIPFMEVSQTPPSHHLEWADVFVIAPLSANTLAKIAQGISDNSLTEVVRGWDRNKPFYDAPAIDPVTWNNPLTRQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00307 159 Pfam Flavoprotein 50 158 IPR003382 GO:0003824
Vimu6g00307 159 Gene3D - 35 159 IPR036551 GO:0003824
Vimu6g00307 159 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 101 159 - -
Vimu6g00307 159 MobiDBLite consensus disorder prediction 1 40 - -
Vimu6g00307 159 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 47 158 IPR036551 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00307 Vimu-Chr6 3708222 3708971 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00307 K01598 - gmx:100812679 126.716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00504 9 5976711 5981465 Vimu6g00307 6 3708222 3708971 PCT