Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00228 ATGAAAACAGTTGAATCTCCTGGTTGTTGTTCTTGCTGTTGTAGTTATAGCATGGCATACAGGAGAAGGCAAAGTCTATCAAGGGCTTCCACTTTCAAGGAAGAATTTCATGATCCAACATCATTGGATGTTGCTAAGGATTCTGATCATAACCATGCTTCTCCACCAATCCTCTCACCTTCCTCTTCTTCTACTTCTTCTTCTTCTTCTCTCCCTACTCAACCCCCCAAACCTTCTGCTTCTCGTTACCAACCCTCTCTTTCCTTTGCATTCGCCACCCCTGACTCCGACCATCAAAGATCCAAGAGCTTTGAGGCTTACGGAAATAGCAACTCCAAGTCTGGTTTCTGGGGTGTGATTGCGCAGAAAGCCAAATCAATTCTGGATGATGATAAGCCTATCTCACCACATGGAATCAAGCCCCAGACAACCAAATCATACTCTTTTAATACCTTTTCAGCTCCTCCTGCAACTCAGAACACTCCTTCAGAATTCAAGCCAGTATATGAATCCCTCGACACTAACAGAAAAGTGGACGGTCCTAAATTTCGGAAGGGCTTGGACAGAATCACTTCATCCCTCAATCAACTAGGTGACACTTTTGAGAAGGCTTTTGAGGAAGGCCGAACAATTATGGAGAGTAAGACAGCAGACCTGAGAACTCAAATCAGAAGAAAATCAAGTAACTCTGGGGACACACACCAGACTTCAGATTTGAGAAATCCATTGCAAGAAGCTGCCGAGAAAGAGAAGCAATCTAGCCATGAATCAAAACTCAAGGCATCACGCGACGTAAGGTGGCAACTACGCAATCATGTGACACTGCCCTCACTAGTTCATGTAGTGAAGGCATGCAGTGTCTTGCATAATTTTGGAGTTCTTAATAGTCTTAAAGTTAGCATAAGAGTGACTCTTGTTACCTATATAGGCATTCATACTCAATGTAGAGGCATGAAACTAAGTCTAACTTATTATGAAACTGAGGGAGTGATAGTTGTATATCCGAATCAGCAGTTTTGGTTTCTTAATGTGGCGTTGGCAACAGCTGCCAAAGCAAAACTACTTCTTCGGGAGCTAAAATCCGTAAAAGCAGATTTAGCTTTTGCTAAAGCAAGATGTGCTCAACTTGAAGAAGAGAATAAAATACTCCGGGACAAAGGGGGCAGTGACAAGGGACAGAACGGTGAAGATGATGATGATATGATAAGGCATCAATTGGAGACACTTCTTGCTGAGAAGGCTCGTCTGGCGAATGAGAATGAGACATATGCAAGGGAGAACCGTTTCTTAAGGGAAATTGTGGAGTATCATCAGCTGACTATGCAAGATGTGGTGTACATAAATGAGGGCATGGAAGAAGTCACTGAAGTTTACCCTTCAGATGTCTCTGGGGTGACACGGTTGTTATCAGTCACACCACGTTCACCATCACCTGCTAGGGATGTTCTTGTCTCACCAGGCCTACCTATGCTGTCAAAAGAAATATTTACTGTGAAAGAAGAGGATGAGAACAGCACTACAGAAGTTGAGACTCCTGCTACTGTCTGA 1548 0.4335 MKTVESPGCCSCCCSYSMAYRRRQSLSRASTFKEEFHDPTSLDVAKDSDHNHASPPILSPSSSSTSSSSSLPTQPPKPSASRYQPSLSFAFATPDSDHQRSKSFEAYGNSNSKSGFWGVIAQKAKSILDDDKPISPHGIKPQTTKSYSFNTFSAPPATQNTPSEFKPVYESLDTNRKVDGPKFRKGLDRITSSLNQLGDTFEKAFEEGRTIMESKTADLRTQIRRKSSNSGDTHQTSDLRNPLQEAAEKEKQSSHESKLKASRDVRWQLRNHVTLPSLVHVVKACSVLHNFGVLNSLKVSIRVTLVTYIGIHTQCRGMKLSLTYYETEGVIVVYPNQQFWFLNVALATAAKAKLLLRELKSVKADLAFAKARCAQLEEENKILRDKGGSDKGQNGEDDDDMIRHQLETLLAEKARLANENETYARENRFLREIVEYHQLTMQDVVYINEGMEEVTEVYPSDVSGVTRLLSVTPRSPSPARDVLVSPGLPMLSKEIFTVKEEDENSTTEVETPATV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00228 515 MobiDBLite consensus disorder prediction 32 50 - -
Vimu6g00228 515 Coils Coil 406 433 - -
Vimu6g00228 515 MobiDBLite consensus disorder prediction 228 242 - -
Vimu6g00228 515 Coils Coil 352 386 - -
Vimu6g00228 515 MobiDBLite consensus disorder prediction 128 165 - -
Vimu6g00228 515 PANTHER UNCHARACTERIZED 343 500 - -
Vimu6g00228 515 MobiDBLite consensus disorder prediction 243 259 - -
Vimu6g00228 515 MobiDBLite consensus disorder prediction 216 259 - -
Vimu6g00228 515 MobiDBLite consensus disorder prediction 139 165 - -
Vimu6g00228 515 MobiDBLite consensus disorder prediction 54 84 - -
Vimu6g00228 515 MobiDBLite consensus disorder prediction 32 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00228 Vimu-Chr6 2845735 2848377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00228 - - gmx:100819083 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00228 6 2845735 2848377 Vimu6g00228 6 2845735 2848377 ECH
Vimu6g00228 6 2845735 2848377 Vimu9g01597 9 25295908 25297532 PCT