Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00222 ATGGCTGCCATGGGTATGTTGTGTTTGTCTCCACTATCAGGTCAACAACAAGCACTTTCTTTCCCATCATTGCCATCTACATCGCCTAAACTTCAGAATCGTCCTCTGTATCTCACCAATTTATCTCATTTTCCTCAAAGGCTGAGACCTTCTTTCGCCGGAGGGAACGGCGGAGATGGGGTCGGGCGTGGTGGAGGTGGTGGTGGTGGAGGTGGAGGTGACGACGGAGATTCCAAAGATTCTTCTTTTGGGATTTTGGGTCTCTTTCTGAACGGGTGGAGATCAAGGGTTGCTGCTGATCCACAATTTCCCTTCAAGGTTTTGATGGAAGAGCTGGTGGGTGTGAGTGCTTGTGTTTTAGGTGACATGGCTTCAAGGCCTAATTTTGGGTTGAATGAACTTGACTTTGTCTTTTCAACTTTGGTTGTTGGGGCTATTCTGAATTTCACTCTGATGTATCTGTTGGCACCTACCATGACATCATCAGCATCAAGCGTACCTGGCATATTTGCCTCATGCCCCAAGAGTCACATGTTTGAGCCTGGTGCTTTTTCCCTTCTTGATAGGTTTGGAACCTTGGTATACAAAGGTACCATTTTTGCTGTTGTCGGTTTTGGTGCTGGACTAGTTGGAACCACACTTTCCAATGGGTTGATCAGTATGAGGAAGAAGATGGATCCAACCTTTGAGACCCCTAACAAGCCCCCACCTACCCTTTTGAATGCTCTCACATGGGCAGGTCACATGGGGGTTAGCAGCAACCTGAGGTATCAGACTCTGAATGGTGTTGAGTTCATGCTGGAGAGAGTGCTTAACCCCTTGGCCTTCAAGTCCTCAGTGTTGGTTCTGAGGTGTGTGAACAATGTTCTTGGGGGCATGTCCTTTGTGGTATTGGCAAGGCTAACTGGGGCACAGAGTGTTGGGGAGAAGAAAGAGAATGAGATTGCTTTGATTTCTGAGAAAGAGAAGGTGGAATCGTCGGAGAGGGAAGAGGGGTTGCAGAATCAGTCGACAGAACCATCAAAGTGA 1029 0.4772 MAAMGMLCLSPLSGQQQALSFPSLPSTSPKLQNRPLYLTNLSHFPQRLRPSFAGGNGGDGVGRGGGGGGGGGGDDGDSKDSSFGILGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGAILNFTLMYLLAPTMTSSASSVPGIFASCPKSHMFEPGAFSLLDRFGTLVYKGTIFAVVGFGAGLVGTTLSNGLISMRKKMDPTFETPNKPPPTLLNALTWAGHMGVSSNLRYQTLNGVEFMLERVLNPLAFKSSVLVLRCVNNVLGGMSFVVLARLTGAQSVGEKKENEIALISEKEKVESSEREEGLQNQSTEPSK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00222 342 MobiDBLite consensus disorder prediction 318 332 - -
Vimu6g00222 342 MobiDBLite consensus disorder prediction 52 76 - -
Vimu6g00222 342 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 85 328 - -
Vimu6g00222 342 Pfam Protein RETICULATA-related 96 263 IPR021825 -
Vimu6g00222 342 MobiDBLite consensus disorder prediction 318 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00222 Vimu-Chr6 2763294 2764322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00222 - - gmx:100815884 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00222 6 2763294 2764322 Vimu9g01601 9 25317785 25318705 PCT