Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00150 ATGGAAACGGGAGGTGCTGACGTAGCCGAAACGACGACGAATCAAGGCGAACGGAGTTCGGAGAAGAAGAGTTTGAGAACGGAGGTTGATACTTCAGCACCCTTTGAATCGGTTAAGGATGCGGTCACAATGTTTGGGGGTATTGGTTACTGGAAACCCCTTCACAGTAAGATCAGTACGTGTGTGCCTTCTCAGTCAGAGCAGCACTCAGCAGAGCTGAGCGCTGAAAAACTGGAGGAACAGGCTTCAGTATTGGAGAAAGAACTGATCTTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAGTACCAAAAAGATTGTTGAAGAATTGAAATCAAAGATACAGAAAGAACAGTCTGAAGTGAATATGAATCTTCAGCTTGGCGAACGTGATAGAAAATCAGCTGTTGAAGAGAATGAAGAAAAGGAAAATCAAATGAGTCAATTGAATGTTCTTCAACCTTCAAGACAAGGTTTTGCTTCCCATCTTCCATCTGTGCCGGGTTTAATATTACAGGAACTGAAGCAGGCCAAGTTGAATTTAACCAGAACTACTGTTGATCTCGCAGATGTCCGAACTTCTGTTGAATCGCTCAATAAGAAGTTAGAGAAGGAAAGAATCTCACTTGAGAAAACACGTGAGAGCTTAGCTCAAAATACTTCAAAAATATCTTCTCTTGATGAAGAGCTAAACCATACCAGATTAAGGCTGCAAATAGCAAAAGGGGCTGAAATTAAAGACGCTTCAGATGATCCTTCGGTTATTACTAGAGAGCTCCAGCGATTGAGTTCTGAGGCCGAGAATTTCAAAATAATGGGAGAATCTGCAAAAGCAGAAGTTCTGAGAATCATGTCTGAGATTGAACAGACAAAAACAATGATAAGAACTGCTGAAATCAGATTAGTTGCAGCCAGAAAAATGAAAGAAGCTGCTAGAGCTGCAGAAGCTTTTGCCCTTGTAGAAATTAACGCATTATCTAATCATGAAAATGAGAGTTTACCTGGAAATCAGATTACTCTTTCATTTGAAGAGTATACCGCTCTGACATGCAAAGCCCATGATGCAGAGGAACAATCTAGGAAGAGAGTTGCAAATGCAATGCTTGAAGTTGATGAAACAAATTTGTCAAACATGGACATTTTGAAAAGGGTAGAAGAAGCTACAGAGGAAATTAAAACCAGCAAGAAGGCCCTTGAAGAAGCTCTGGAAAGGGTAGAAGCTGCAAATAGAGACAAGGTAGAGGTTGAAGAGGCTTTAAGGAATTGGCGCTCGGAGGGTCACAAAAGACGCTCTATACAAAACCCCACCAAGTTCAAAACCTCTTGTTCCTCTCATCATTGGAAAGATCCTCGGTTACTAGATGTTAATGGATTGCATCTGGTAAATGATGAAGCAAAGCCAGTTCTAAAGTCAACCCTATCAATAGGACAAATACTTAGCAGAAAGCTGCTTCAACCACAAGAGTTTGAAGCTGGAGAAAGAATCTCAATGAAACAGAATGTGTCTCTGGGTCAGATGCTTGGTAAACAAAACATTGATCCACCAATTGACAGACAAATTGAGAAAGGAAGTGGCCGTAAGTTGTTTTCTACCAAGAGAAATAAATTTGGATTTGCACGATTCTCTCATATTTTGTCAAAACAGCAGAAGAATAAGAAGAAGCCAACCCTGAATTTGAGGTGA 1692 0.4048 METGGADVAETTTNQGERSSEKKSLRTEVDTSAPFESVKDAVTMFGGIGYWKPLHSKISTCVPSQSEQHSAELSAEKLEEQASVLEKELILKERETLDVLKELESTKKIVEELKSKIQKEQSEVNMNLQLGERDRKSAVEENEEKENQMSQLNVLQPSRQGFASHLPSVPGLILQELKQAKLNLTRTTVDLADVRTSVESLNKKLEKERISLEKTRESLAQNTSKISSLDEELNHTRLRLQIAKGAEIKDASDDPSVITRELQRLSSEAENFKIMGESAKAEVLRIMSEIEQTKTMIRTAEIRLVAARKMKEAARAAEAFALVEINALSNHENESLPGNQITLSFEEYTALTCKAHDAEEQSRKRVANAMLEVDETNLSNMDILKRVEEATEEIKTSKKALEEALERVEAANRDKVEVEEALRNWRSEGHKRRSIQNPTKFKTSCSSHHWKDPRLLDVNGLHLVNDEAKPVLKSTLSIGQILSRKLLQPQEFEAGERISMKQNVSLGQMLGKQNIDPPIDRQIEKGSGRKLFSTKRNKFGFARFSHILSKQQKNKKKPTLNLR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00150 563 Coils Coil 100 123 - -
Vimu6g00150 563 Pfam Weak chloroplast movement under blue light 173 432 IPR008545 -
Vimu6g00150 563 Pfam Weak chloroplast movement under blue light 27 126 IPR008545 -
Vimu6g00150 563 MobiDBLite consensus disorder prediction 1 15 - -
Vimu6g00150 563 Coils Coil 68 95 - -
Vimu6g00150 563 Coils Coil 384 428 - -
Vimu6g00150 563 Coils Coil 128 155 - -
Vimu6g00150 563 MobiDBLite consensus disorder prediction 1 32 - -
Vimu6g00150 563 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 28 131 - -
Vimu6g00150 563 Coils Coil 195 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00150 Vimu-Chr6 1964803 1968032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00150 - - gmx:100785049 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00150 6 1964803 1968032 Vimu6g00150 6 1964803 1968032 ECH
Vimu6g00150 6 1964803 1968032 Vimu9g00943 9 15723802 15726131 PCT