Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00113 ATGGCGAATCAAGTCTCAGTTATCAACCCTTCCTACTGTTCTGCTGACTCCATCACTCTACAGATTAATACTGAGAAAGGAGAGACTTACAATGAAAACGATGTTCGTCTCTTTTATTTGGACGATACTATTTTCACACTTCACAACCGTCGTGTCTTATATGATGATACACAAAAACCCATCGTCACCCTCTACAGAAAGGCTGTGACGTTGCATGAGCGATGCAATGTTTTCAAGGGTGAAAGCACTGATTCATCTCAATTGCTATTCTCTGTGGAGAAAATCAATAATAAATCGATCTCTCCTGGGATTACTAAATTAAACGTGTTCCTTGCAAAAAACCAAGAAAAAAAGAAAAGTGACTTTAGAGTCATCGTTTCTGGTATTCAAAGCTCCTGTACAGTTTATATCGGTGAATCTCCTAATATTATAGCTAAGATGGAGAATAACGGTGGCTTCAATGTCTTGGTCTATCCCAACGTGGACTACGCATTCATAGTAGCACTGCTTATGATTGTTAAGGACGTGAAAGTTGGTATTCAAACTGCTCTAGGCATAAAATTGATTTCATCAGTGGTATCGGCTGCATTAGGCGACTAA 600 0.39 MANQVSVINPSYCSADSITLQINTEKGETYNENDVRLFYLDDTIFTLHNRRVLYDDTQKPIVTLYRKAVTLHERCNVFKGESTDSSQLLFSVEKINNKSISPGITKLNVFLAKNQEKKKSDFRVIVSGIQSSCTVYIGESPNIIAKMENNGGFNVLVYPNVDYAFIVALLMIVKDVKVGIQTALGIKLISSVVSAALGD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00113 199 PANTHER - 28 175 IPR007612 -
Vimu6g00113 199 Gene3D - 5 178 IPR038595 -
Vimu6g00113 199 Pfam LURP-one-related 8 172 IPR007612 -
Vimu6g00113 199 SUPERFAMILY Tubby C-terminal domain-like 6 176 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00113 Vimu-Chr6 1360916 1369679 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00113 - - vra:106758374 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00113 6 1360916 1369679 Vimu9g00910 9 14701948 14703146 PCT