Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00081 ATGGAGAGCACGGGGCGTGTGCCATTGTCGGATGTAGTGGCAGATTGTGCGAAGCGGTGGTTCAAGGACACTCTCAAGGAGGCTAAGGCAGGTGATATAAACATGCAGGTCTTGGTGGGTCAGATGTACTATCATGGCTATGGTATTCCCAAAGATGGTCAGAAGGCTGATGTTGTTAGTTTGGGAATGAAGGGAAGACTTTGGCTGACTAAAGCCTCGAGGGTCAGATCCTCAGTCTGGAGAGTTGGCCGTAAACCTCCAGGTTATAATGCAAGTGATTCGGAGTCTGACGATCTGGAAAATGATTCTTGA 312 0.4872 MESTGRVPLSDVVADCAKRWFKDTLKEAKAGDINMQVLVGQMYYHGYGIPKDGQKADVVSLGMKGRLWLTKASRVRSSVWRVGRKPPGYNASDSESDDLENDS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00081 103 PANTHER EXPRESSED PROTEIN 3 102 - -
Vimu6g00081 103 MobiDBLite consensus disorder prediction 83 103 - -
Vimu6g00081 103 Gene3D Tetratricopeptide repeat domain 14 79 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00081 Vimu-Chr6 981358 982317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00081 - - pvu:PHAVU_008G090100g 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00081 6 981358 982317 Vimu6g00081 6 981358 982317 ECH
Vimu6g00081 6 981358 982317 Vimu9g00899 9 14270555 14272190 PCT