Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu6g00045 | ATGCCGTGCCTCAACCTCTCCACCAACGTCAACCTCGACGGCGTCGATACCTCTTCCATTCTCTCCGAAGCCACCTCAACCGTCGCCAGCATCATTGGCAAACCCGAAGCCTATGTGATGATTGTATTGAAAGGATCAGTACCTATATCTTTCGGTGGAAATGAGCAGCCAGCGGCTTATGGTGAATTGGTGTCCATTGGTGGTCTGAACCCTGATGTCAACAAGAAACTCAGTGCCGCCATTGCTGCAATTCTTGAAACCAAATTGTCTGTTCCAAAGTCGCGATACTTCTTGAAGTTTTACGACACTAAGGCAAGTATCTACACTCGAGAGTTCTCCTCAAAATAA | 348 | 0.4741 | MPCLNLSTNVNLDGVDTSSILSEATSTVASIIGKPEAYVMIVLKGSVPISFGGNEQPAAYGELVSIGGLNPDVNKKLSAAIAAILETKLSVPKSRYFLKFYDTKASIYTREFSSK | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu6g00045 | 115 | PANTHER | D-DOPACHROME DECARBOXYLASE | 1 | 106 | IPR001398 | - | |
| Vimu6g00045 | 115 | FunFam | Tautomerase/MIF superfamily protein | 1 | 110 | - | - | |
| Vimu6g00045 | 115 | Pfam | Macrophage migration inhibitory factor (MIF) | 2 | 106 | IPR001398 | - | |
| Vimu6g00045 | 115 | SUPERFAMILY | Tautomerase/MIF | 1 | 105 | IPR014347 | - | |
| Vimu6g00045 | 115 | Gene3D | Macrophage Migration Inhibitory Factor | 2 | 110 | IPR014347 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu6g00045 | Vimu-Chr6 | 542516 | 545291 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu6g00045 | K07253 | - | twl:120013291 | 194.897 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu6g00045 | 6 | 542516 | 545291 | Vimu6g00045 | 6 | 542516 | 545291 | ECH | |
| Vimu6g00045 | 6 | 542516 | 545291 | Vimu9g00852 | 9 | 13106121 | 13109123 | PCT |