Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00044 ATGGCCGCTCCAACACCCACCCCACAGGTTCTCCCCGTCTCAAATCCTCAATCCACCATCACTACCACCGTCACCACCGCGGAACAGCAGCCACCGCAACCCGCAGTCCGCGCCATCATATCCTACTTCTCGGACTCCCTCCGTCACAGCCTCTCGCATCGCCGTCCCTGGCCGGAGCTCATGGACCGCTCGGCGCTGGCGAAACCGATGTCATTCTCGGAGGCGACGCTGCGCGTGCGACACAACGTCTCGTACTTCCGCGTCAACTACTACGTGGTGGTTTCGCTGATCCTGGCGGTGTCGCTCCTAACCAGCCCCTTCTCCCTGGTGCTCCTCCTCTCCCTCCTCGCCTCCTGGCTCTTCCTCTATCTCCTCCGTCCCACCGACCGCCCCCTCCGCCTCTTCGGCCGTACCTTCACGGATTTCGAGACGCTCTCTCTCCTCGCCGCCGCTTCCTTCTTCCTCCTCTTCCTGACCCCCCTCGGCTCCCTCCTCGTCACCGCCTTTACCGTCTCCATCGCCCTCGTCGCAGCCCACGCCGCATTCAGAGTTCCCGAGGACCTCTTCCTCGACGACCGCGACTCCACCCAGCCGGCCGGCTTCCTTTCCATCCTCCGCGCCGCTGTCAACGCCCCACCCGTCCCCCCACCCGTCCCCAGCCGCGGCTGA 669 0.6547 MAAPTPTPQVLPVSNPQSTITTTVTTAEQQPPQPAVRAIISYFSDSLRHSLSHRRPWPELMDRSALAKPMSFSEATLRVRHNVSYFRVNYYVVVSLILAVSLLTSPFSLVLLLSLLASWLFLYLLRPTDRPLRLFGRTFTDFETLSLLAAASFFLLFLTPLGSLLVTAFTVSIALVAAHAAFRVPEDLFLDDRDSTQPAGFLSILRAAVNAPPVPPPVPSRG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00044 222 Pfam PRA1 family protein 50 192 IPR004895 -
Vimu6g00044 222 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 15 194 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00044 Vimu-Chr6 541389 542057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00044 K20359 - gmx:102669622 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00044 6 541389 542057 Vimu9g00846 9 13047638 13048306 PCT