Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02865 ATGCCACTTAAAACGGAACAACCAATCCCAAAACACACCAACCAAAAACTTCCAACAACAATAATGTTGAATGTTTTCGCGGTGAGTCTGGTCATCACTTCACTGGCCGCATCGGCCATACTGTCTCCCGCTCCAGCCACGCACCAGAAGCAGGGAGCCAACACCATTGTCAGAGAAGGCCATAGAGTTGTGGTGGTTGAATACGACCAAGATGGCCATCACAACACCAAAATCTCAATCTCCCCAGAGCAACCCACACATCACCACCACGTTTTAGACAACGCCAAAGACAGGATCAGAGAGGCTGCCTCCGTTCTCCCTAACGTCGGTCAAGGCATTTCACAACCGGAAGATGCCGCTTTTCTGCATGCCCCTAAGGAGCTCGTTTGCGATGCCTACGGAAGATGCAAGCAAAGAATCGCGGATGCAATGGAGAAGACCAAGGACAAGGCTCAAGAGGCCCTCCAGAAGAAGAAGGAGAAGGTTGCGGCCAACAAGGAGGCGGCGCGGCGAGTGGGTGATAGTGTTGCCGATGCACTTGGAAAGACAAAGGAAAGCGTGCATGATAAAGCCCGTGATGTGCACGAATACGCGCAGGAGACTGTAGAAACAGCGAAGGAGCATGTGGCTCATAACGTCTCAGAGGCCAGGGATTCTTTGCGCCGCCTCAAACACGCATTAAAAAGCAGTTTTGGATCGTTGGAGAGCCTGAATTCGGTGATGGGGGTGGCCAACTTGCTGGGGTTTGCCACTGCATATGGGATGTGTGTGTGGGTTACGTTTATCTCCAGCTACGTGCAGTCGAGGGCCATGGCGAGGCACCAGTTCGCAGTGGTGCAGAGCAAAATCTACCCTGTTTATTTCAGGGCCATGGCTTATAGCGTTGGGGTGGCCCTATTAGGTCATGTTTTCGGTAATACAGACACTCTGGTCTCCAACAAATCTCACGCTTTGCAAGCATATAACCTTCTCGCCTCTCTGGCCACTCTTTTCTTCAATTCTCTTTACTTGGAGCCTCGGGCCACCAAGCTGATGTTCGAAAGGATAAAAATAGAAAAGGAAGAAGGAAGAGGCAGAGAAGATATGAGTGGTGACCGTGGCAGAACAGAACATCAACGCACAGGTGAGCCTTCCAGAAGCGCAGATCAGGATGCAGTGAGATCAAGAATAATCAAGCTAAACGACAAGCTCAAGAAATTGAATTCCTATTCCTCTGTCCTAAACATCCTCAATCTCATGTCTCTCACATGGCATCTCGTTTATTTGGCTCAACGCCTTCACACCCCTTGCTAA 1293 0.5012 MPLKTEQPIPKHTNQKLPTTIMLNVFAVSLVITSLAASAILSPAPATHQKQGANTIVREGHRVVVVEYDQDGHHNTKISISPEQPTHHHHVLDNAKDRIREAASVLPNVGQGISQPEDAAFLHAPKELVCDAYGRCKQRIADAMEKTKDKAQEALQKKKEKVAANKEAARRVGDSVADALGKTKESVHDKARDVHEYAQETVETAKEHVAHNVSEARDSLRRLKHALKSSFGSLESLNSVMGVANLLGFATAYGMCVWVTFISSYVQSRAMARHQFAVVQSKIYPVYFRAMAYSVGVALLGHVFGNTDTLVSNKSHALQAYNLLASLATLFFNSLYLEPRATKLMFERIKIEKEEGRGREDMSGDRGRTEHQRTGEPSRSADQDAVRSRIIKLNDKLKKLNSYSSVLNILNLMSLTWHLVYLAQRLHTPC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02865 430 SUPERFAMILY Apolipoprotein A-I 135 233 - -
Vimu5g02865 430 MobiDBLite consensus disorder prediction 355 385 - -
Vimu5g02865 430 Gene3D - 166 233 - -
Vimu5g02865 430 Coils Coil 137 172 - -
Vimu5g02865 430 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 166 427 - -
Vimu5g02865 430 Pfam Domain of unknown function (DUF4149) 248 348 IPR025423 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02865 - - lja:Lj3g3v3754400.1 464.151