Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02859 ATGACAACAGCCACGACAACAACCACTCCCAATCTCATGAATGCGCTTCAGTACGACGCCTATGGCGGAGGCCCCGCCGGCCTGAAGCACGTTCAAGTTGGCGTTCCCACTCCCAAGACAAGTGAGGTTTTGCTGAAATTGGAAGCAGTCAGCATAAACCCCATTGATTGGAAGATTCAGACGGGTGTTCTGCGCGCTCTGTTTTTACCCAGAACCTTTCCCCACATTCCTTGCACTGATGTCGCTGGAGAAATCGTTGAGATCGGACCGCAAGTTAAAGATTTCAAAGTGGGAGACAAAGTCCTTGCCAAACTCACTCATCAATATGGAGGTGGACTGGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACAGCTTCCAGACCACCTGAAGTCCCAGCTGCTGAAGCTGCAGCATTACCTATTGCCGCACTCACAGCTCGTGATGCTCTCATTCAAATTGCAGAAGTCAAGCTTGATGGAACTGGCCAGCCCAAGAACATTTTAGTAACTGCTGCTTCAGGTGGTGTAGGTCACTATGCTGTTCAACTAGCAAAGCTAGGGAACACCCATGTCACAGCCACTTGTGGGGCTCGCAACATTGAGTTTGTTAAGGGTTTAGGTGCCGATGAGGTTCTTGACTACAGGACTCCGGAGGGGGCAGCACTCAAGAGTCCATCTGGTAGAAAATATGATGCAGTCATACACTGTACGACAGGAATACCTTGGTCAACTTTTGAGCCTAATTTGGCTGAAAAGGGCGTTGTAGTTGATTTAACACCTAATGCAAGTTCGTTGTGGACTGCTGCTCTAAAGAAAGTTACTTTTGCCAAGAAGCGGCTGGTGCCATTTGTTGTAACTGTCCAGCGTGAGGGCCTGGAACATCTAGTCCAATTACTAAAGGATGGGAAACTTAAGTCTGTTATTGACTCCAAGTTTCCTTTGAGCAAAGCTGAAGATGCTTGGGCTAAGAGTATTGATGGCCATGCTACTGGAAAAATCATTGTGGAACCATAG 1014 0.4793 MTTATTTTTPNLMNALQYDAYGGGPAGLKHVQVGVPTPKTSEVLLKLEAVSINPIDWKIQTGVLRALFLPRTFPHIPCTDVAGEIVEIGPQVKDFKVGDKVLAKLTHQYGGGLAEFAVASESLTASRPPEVPAAEAAALPIAALTARDALIQIAEVKLDGTGQPKNILVTAASGGVGHYAVQLAKLGNTHVTATCGARNIEFVKGLGADEVLDYRTPEGAALKSPSGRKYDAVIHCTTGIPWSTFEPNLAEKGVVVDLTPNASSLWTAALKKVTFAKKRLVPFVVTVQREGLEHLVQLLKDGKLKSVIDSKFPLSKAEDAWAKSIDGHATGKIIVEP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02859 337 Pfam Alcohol dehydrogenase GroES-like domain 41 107 IPR013154 -
Vimu5g02859 337 Gene3D - 20 335 - -
Vimu5g02859 337 Pfam Zinc-binding dehydrogenase 206 335 - -
Vimu5g02859 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 286 IPR036291 -
Vimu5g02859 337 Gene3D - 150 288 - -
Vimu5g02859 337 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 11 336 - -
Vimu5g02859 337 SUPERFAMILY GroES-like 10 155 IPR011032 -
Vimu5g02859 337 SMART PKS_ER_names_mod 23 335 IPR020843 GO:0016491
Vimu5g02859 337 CDD MDR1 17 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02859 Vimu-Chr5 37783270 37785352 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02859 K00224 - gmx:100790762 564.688