Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02857 ATGGCAGAGAATGTGATGAATGCGATTCAGTACGAGAAGTATGGAGGAGGTCCCGGCGGCTTGAAGCATGTTGAAGTTGGAGTTCCCAGTCCAAAGAAGAAGGAGGTTTTGATGAAAGTGGAAGCTGTTAGCATCAATCCAGTCGATTGGAAGATTCAGAAGGGTGTTATGAGACCTTTATTTGTCCCCGGAAACTTTCCTCATACACCTTGCACCGATATCGCCGGAGAGGTGGTTCAGATCGGACCACAAGTCAACGATTTCAAAGTTGGAGACAAAGTCCTTTCCAGGCTCTCTACTCGATATGGAGGTGGATTGGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACAGCTTTGAGGCCACCTGAAGTCTCGGCTGCTGAAGCTGCAGCGTTACCTATTGCCGGGCTCACAGCTCGTGATGCCCTCGCTCAAATTGCAGGAGTCAAGCTTGATGGGACTGGTGAGCCTAAGAACGTTCTGGTAACTGCTGCTTCAGGTGGTGTAGGTCACTATGCTGTTCAACTGGCAAAGCTAGGGAACAACCATGTCACGGCCACTTGTGGGGCTCGCAACATTGAGTTTGTTAAGGGCTTAGGTGCGGACGAGGTTCTTGACTACAGGACGCCGGAAGGGGCAGCGCTCAAGAGTCCATCTGGTAGGAAATATGATGCAGTCATAAACTGCACAACTGGAATACCTTGGTCGACTTTTGATGCTAATTTGACTGAAAAGGCAGTGGTGGTTGATTTAACTCCTAATCCATCTTCATTTCTGACTGCTGCACTTAAGAAAGTTACTTTTTCGAAGAAGCGGCTGGTGCCATTTTTTGTAGATGTCAAGCGTGAGGGCCTGGACAATCTACTTCAGTTATTGAAGGATGGGAAACTCAAGTCTGTTATTGATTCCAGGTTCCCTTTGAGCAAAGCCGAAGATGCTTGGGCTAAGAGCATTGATGGCCATGCCACTGGAAAAATCATTGTGGAGCCATAG 993 0.4814 MAENVMNAIQYEKYGGGPGGLKHVEVGVPSPKKKEVLMKVEAVSINPVDWKIQKGVMRPLFVPGNFPHTPCTDIAGEVVQIGPQVNDFKVGDKVLSRLSTRYGGGLAEFAVASESLTALRPPEVSAAEAAALPIAGLTARDALAQIAGVKLDGTGEPKNVLVTAASGGVGHYAVQLAKLGNNHVTATCGARNIEFVKGLGADEVLDYRTPEGAALKSPSGRKYDAVINCTTGIPWSTFDANLTEKAVVVDLTPNPSSFLTAALKKVTFSKKRLVPFFVDVKREGLDNLLQLLKDGKLKSVIDSRFPLSKAEDAWAKSIDGHATGKIIVEP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02857 330 CDD MDR1 9 328 - -
Vimu5g02857 330 Pfam Alcohol dehydrogenase GroES-like domain 34 97 IPR013154 -
Vimu5g02857 330 Gene3D - 13 328 - -
Vimu5g02857 330 Gene3D - 143 281 - -
Vimu5g02857 330 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 4 329 - -
Vimu5g02857 330 SMART PKS_ER_names_mod 16 328 IPR020843 GO:0016491
Vimu5g02857 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 277 IPR036291 -
Vimu5g02857 330 SUPERFAMILY GroES-like 3 151 IPR011032 -
Vimu5g02857 330 Pfam Zinc-binding dehydrogenase 199 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02857 Vimu-Chr5 37773534 37774890 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02857 K00224 - gmx:100790762 551.592