Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02855 TTGCTGGCGGTGGAAACCACGGCGGCGATGGCGGAAGGGGAAGAAATTCGGCCTGACTTGCTGAAAAACACGCCATCTAACATTGCGAGATTGGAGGATGTGATCGAACACTCTAAAGCGAGGCAGAAGTATCTGGCGCAGACGTGTAGCCCCTCTGATGGCGGTGATGTTAGGTGGTATTTTTGTAAGATCCCTCTCGCTCCCAACGAGTTGGCAGCGTCAGTCCCACGAACAGAGATTGTAGGCAAGAGTGACTATTTTCGTTTTGGCATGAGAGATTCTCTAGCCATTGAAGCATCTTTCTTGCAGAGAGAGGAAGAACTGCTTTCTAGTTGGTGGAGGGAGTACGCGGAATGCAGTGAAGGCCCAAGAGAACGACAAAGTTCCACTACAAAGTCAGATACTGGATCTTTTTTGGGACGTAGTGAACCATCTCAACTCTATGAAATAGAAGAAGAGAGGGTTGGTGTCCCTGTAAAGGGAGGACTGTACGAGGTAGACTTGATTTCCAGACATTGTTTCCCTGTTTATTGGAACGGAGAAAACAGACGTGTCCTCAGAGGCCATTGGTTTGCACGTAAAGGGGGCCTGGATTGGCTACCACTTCGTGAAGACGTTTCTGAACAACTAGAGATTGCTTATCGAAGTCAGGTTTGGCACCGAAGGACATTCCAACCATCAGGACTTTTCGCTGCTCGAGTTGATTTGCAAGGCTCCACTCAGGGCCTGCATGCCCTTTTCACAGGAGAAGACGACACCTGGGAGGCCTGGCTAAATATTGATGCTTCTGGCTTTTCTAGTTTTGTTAGTTTTACTGGAAATGCAATCAAGCTTAGACGTGGTTACTCTCCATCAAACTCTCCAAAACCAACCCAGGATGAACTAAGACAACAGAAGGAGGAGGCTATGGATGATTACTGCTCCCAGGTCCCTGTTCGTCACTTGGTATTTATGGTTCATGGTATTGGCCAAAGGTTGGAAAAATCCAATTTGGTTGATGATGTGGGCAATTTCCGGCATATTACAGCAAGTCTTGCAGAGCAGCACCTTACTGCTCATCAGCGTGGCACCCAAAGGGTCCTCTTTATTCCATGCCAGTGGAGAAAAGGTTTGAAGCTGAGTGGTGAAACTGCTGTTGAAAAAATAACATTAGATGGAGTGCGGGGATTGCGTGTCACGTTGAGTGCAACTGTTCATGATGTATTATACTACATGAGCCCAATTTACTGTCAAGACATAATTGACTCGGTATCTAACCAACTGAATAGATTATATCTGAAGTTTCTCAAAAGGAATCCTGGATATGATGGAAAGGTTTCATTATATGGTCATTCTCTGGGAAGTGTTCTCTCATATGATATCCTTTGCCATCAAGATAATCTATCATCTCCATTTCCTATGGAATGGATGTATAAGGAACATGATCAAAATGAAAAGTCACTCCCTAATAAGGAATATAATTATGTGCAGAACTCACTAATCAATCCGGATGACACTTTTAGTATGGTGAGTCCCTCTGAAGAAAATAAGGGTACTCAACATACTAGTCCAGATATGGAGGCAGAATATTGTGAGGAGTCTTCAGTTTTAGGTCCTGAGTTATCAAGTGTACATGAATTTTCTGCAGAACCTAGCTTTGTGGAACCAAATAACAAGGGAGATGTTTCTGAGTTCCTTTCTGATTCCAGCTACACGAATGTTGAAAAAATGGATGCGTTGGATGAGCCTGAAAGCATGAATGTTGGGTTGCCAGCAGATAAGGACGAATGTAAAGTTGCAAGAAATAAAGATGAAGTAATAAACAAGCTCAGAGAAGAGATTGATTCATTGAAAGCTGAATTGGAATCACGTCACGGCATTAATCAAACCGAGGAAGAATTACATTCTGTACAGAAGTTATCTAAAAAGTCACCTGCCATACAAGATGCACCAAAGAGTTATACCCCATATATAAAGTACACAAAGCTTCAGTTCGAGGTCGATACATTCTTTGCCGTTGGATCTCCTCTTGGTGTATTTCTTGCACTTCGTAATATTCGCATAGGCATTGTTACCAGTCATCCATTACATCTCGTTGGTTCATTTGCTTCCTTGTATAATAGACCTTTGATATTGGAATCTCTTGGTAAAGGACAAGAATATTGGGAGCAGGAAAATATAAGAGAAGAGATGCCAGCTTGTCGGCAGTTATTCAATATTTTTCACCCCTATGATCCAGTAGCATACAGGATAGAGCCACTTGTATGTAAAGAATACATTAGCCAACGACCAGTTTTGATTCCATATCACAGAGGAGGGAAAAGGTTGCACATTGGATTTCAGGAATTTACTGAAGACTTAGCGGTTCGAACTCACTCAGTAAAGAATTATATGATTTCTGCAAGGGATAAGGTAATCACATTGTGCCAGTCGAGGAAATTTGATAACTCAGAAGGGGAGAGTTCGGAAGAGGAAGAAGAGACATCATATGGATCTTTCATGATAGAGAGGTTAACAGGAAGCAAGAGTGGTCGGATTGATCACATGCTTCAGGACAAGACCTTTGAGCATCCATATCTGCAAGCAATTGGAGCACATACAACCTCCTACACCCACGATTTTGGTTTTGACAACCACAATGACAAGTGGAATGCGAGCTCCGATGTCGAAGGAATTGCGAATCCGAGTCGGAGAGAGCGCGCTGCAGTTCAAACCCAAGGTGAGGTGCAGCAAGGAGGTGATCGCGGTGGCTATTATAGAGGAGGAATGGTCAACGAAAGAACGCATGGTAGTGGTGGCCACAATGGAGTCTCTATCATTGACGCCATTGATGGTTGGAGCTCGTCAGAGTCTTGCCGGTGTCTGAAAGCTATGGGTTGCACCTCTGATGGAAGAAATGGAGATGATGAAGAAGAAGGCGTGATGTGTGTTGGGTGTGACTAG 2922 0.4374 MLAVETTAAMAEGEEIRPDLLKNTPSNIARLEDVIEHSKARQKYLAQTCSPSDGGDVRWYFCKIPLAPNELAASVPRTEIVGKSDYFRFGMRDSLAIEASFLQREEELLSSWWREYAECSEGPRERQSSTTKSDTGSFLGRSEPSQLYEIEEERVGVPVKGGLYEVDLISRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVSEQLEIAYRSQVWHRRTFQPSGLFAARVDLQGSTQGLHALFTGEDDTWEAWLNIDASGFSSFVSFTGNAIKLRRGYSPSNSPKPTQDELRQQKEEAMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAEQHLTAHQRGTQRVLFIPCQWRKGLKLSGETAVEKITLDGVRGLRVTLSATVHDVLYYMSPIYCQDIIDSVSNQLNRLYLKFLKRNPGYDGKVSLYGHSLGSVLSYDILCHQDNLSSPFPMEWMYKEHDQNEKSLPNKEYNYVQNSLINPDDTFSMVSPSEENKGTQHTSPDMEAEYCEESSVLGPELSSVHEFSAEPSFVEPNNKGDVSEFLSDSSYTNVEKMDALDEPESMNVGLPADKDECKVARNKDEVINKLREEIDSLKAELESRHGINQTEEELHSVQKLSKKSPAIQDAPKSYTPYIKYTKLQFEVDTFFAVGSPLGVFLALRNIRIGIVTSHPLHLVGSFASLYNRPLILESLGKGQEYWEQENIREEMPACRQLFNIFHPYDPVAYRIEPLVCKEYISQRPVLIPYHRGGKRLHIGFQEFTEDLAVRTHSVKNYMISARDKVITLCQSRKFDNSEGESSEEEEETSYGSFMIERLTGSKSGRIDHMLQDKTFEHPYLQAIGAHTTSYTHDFGFDNHNDKWNASSDVEGIANPSRRERAAVQTQGEVQQGGDRGGYYRGGMVNERTHGSGGHNGVSIIDAIDGWSSSESCRCLKAMGCTSDGRNGDDEEEGVMCVGCD 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02855 973 Coils Coil 593 620 - -
Vimu5g02855 973 ProSiteProfiles DDHD domain profile. 656 891 IPR004177 GO:0046872
Vimu5g02855 973 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 38 864 - -
Vimu5g02855 973 SMART DDHD_2a 656 866 IPR004177 GO:0046872
Vimu5g02855 973 SUPERFAMILY alpha/beta-Hydrolases 404 470 IPR029058 -
Vimu5g02855 973 MobiDBLite consensus disorder prediction 897 927 - -
Vimu5g02855 973 Pfam DDHD domain 656 818 IPR004177 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02855 5 863 Acyl Lipid Metabolism Gene Families AT1G31480 62.942 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02855 - - gmx:100777360 1469.52