Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02851 ATGTCTGAAGAGCTTATGGAGTTGTCACCAGAGAATTCATCAGTCTCAGGATTCAAGGAAGAATCTTCTGAACATTCGCCATCTGAGAAGTGGTTAAAAACCAGCAAAATTACTCCATTTATACAACTGGATATTCAAGCTGAGTTCATTGAACAAACTAATTCAGGCCATCTTGGATATGGCCATAGCCACCACACTCCTGAAACTGGTGAAAAACATCAGGCCTTAAAATCACATGCAATAACCAATACAGAAAAGACATACACTGTCACCAGAAGAAAAGAAAAGCTATCGAGTGTTCTACTTCCACTGTCTGCAGCTTCATACTATAGTGGAGTATCACCGGAAATGGAAATTGTTGAATCATGTCAAACCATTGAGAAGCTAAACGCATATTTGAAAGCAAAAAAGGATGATGTCAATGCTGGTGTACCAGGCAAATTCTTACGTGCAGTAATGGGTTCAGATGGTGTTGATGTAGGAACTGTGGCTTCAATCATCACGTATTCCTTCTACCTAGATGTAACTTCAGAGAGCGATCAGTTCTGCACAGTACCAATCATTAACATTAACCGGGCAAATCTTGCTTCGCATGTTGAACTCAAGTGGTTGCTTGATTCATGTCATATTGATCAGTCATCCTTAATTTTTGCAGATGAGATTGATTTGGGTTACTATGATCTATTTGGAAGTCTTAACATCGTGCTGTTGAAGGGAAGCAAGATTAACAGTAAGCAAGAGAAATTGAAGCATGCTGTGGTTGAAAATTTTCACTGCAGAAAGGGTGATACAATATATCCATGGGTTAAAACTGTCATCACAGGCGAGGAATGCTCTTGTTGCACGGCCATAGCAGACAAATTTGTAAATTATTCGCCTGAAATTTTGGCTGGCAAATCATTCAGTAAACTTCTGCTAGCTGGCATTCTTTTGGATACTGCGAATCTAAGGGACCCTAGCTGCACCTCCAAAGATAAGTACACGGCTTCATTACTGATCAATGGTGCTGGTCGTTATGGATGCAATGGCTTTTACCAATTATTGAAGTACAAAATGCATGACCTTTCCTCCCTCCAAGTAGCAGATATCTTGTGGAAGGACTTCAAAAAGTGGACAGGACAAGAGAGTGGAGATTCAAGGTCATTGCAAATTGGCATGAGTTGCGTAGGACTTTCAATCGGACAGCTTCTTTCTCGCGCAGAAAATCTTGCACAAGAAATAACAAGCTTTCAGTTGTATGAGAAACTTCGAGCACTTATTGTGGTTACGGGGTACTTTACTGATGAAAAGAACTTCAAGAGAGAAGTTTTGATTTGCACGGAATCTACGAAACTGTTAGAGAGTTTGCTCTTTTTCTTCGATTTTAATGCTTCTCGGCTGCCACTCAAAGCTTTGCACTTTCCAGGTCTGAAGAATGAGATGAAAGCGTACGAGATCGATAAGGTTACATCAAGAAAAATAGTTGAACATCTCATACAAGAGTTCGTTGGGATACCAAAACCCTAG 1506 0.4017 MSEELMELSPENSSVSGFKEESSEHSPSEKWLKTSKITPFIQLDIQAEFIEQTNSGHLGYGHSHHTPETGEKHQALKSHAITNTEKTYTVTRRKEKLSSVLLPLSAASYYSGVSPEMEIVESCQTIEKLNAYLKAKKDDVNAGVPGKFLRAVMGSDGVDVGTVASIITYSFYLDVTSESDQFCTVPIININRANLASHVELKWLLDSCHIDQSSLIFADEIDLGYYDLFGSLNIVLLKGSKINSKQEKLKHAVVENFHCRKGDTIYPWVKTVITGEECSCCTAIADKFVNYSPEILAGKSFSKLLLAGILLDTANLRDPSCTSKDKYTASLLINGAGRYGCNGFYQLLKYKMHDLSSLQVADILWKDFKKWTGQESGDSRSLQIGMSCVGLSIGQLLSRAENLAQEITSFQLYEKLRALIVVTGYFTDEKNFKREVLICTESTKLLESLLFFFDFNASRLPLKALHFPGLKNEMKAYEIDKVTSRKIVEHLIQEFVGIPKP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02851 501 MobiDBLite consensus disorder prediction 1 21 - -
Vimu5g02851 501 Pfam DHHA2 domain 348 488 IPR004097 GO:0005737|GO:0016462
Vimu5g02851 501 SUPERFAMILY DHH phosphoesterases 158 423 IPR038763 -
Vimu5g02851 501 Gene3D DHHA2 domain 354 498 IPR038222 -
Vimu5g02851 501 PANTHER BNIP - RELATED 91 491 - -
Vimu5g02851 501 MobiDBLite consensus disorder prediction 1 30 - -
Vimu5g02851 501 Gene3D - 123 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02851 Vimu-Chr5 37708455 37721926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02851 K01514 - gmx:100802064 805.053