Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02844 ATGAGGGGAAAGGCAGCTTCGGGAAAGACAATTTTGTTCGTATGCATTGCATGCTTTCTTGCAGGAACACTCTTTAGTGGCCAGATATGGACACGACCCTCTAACCATGAAAATACACTGCAACCATCCACACCCGATTGTGATCACAAGCGAAAACTGATTGAAGGTAGATCTGTTGATGTAATGGAGGAAGTGGTGAAGACTCATCAAGCTATCAAGTATCTGGATAAGGCAGTTTCGAAGTTGGAAATGGAACTGACAGCAAGTAGGAGAAGCCAGAGTGGTGGGAAGCAAATGCGAAAGCATAATGTACAAAAGGCTTTTGTGGTGATTGGTATTAACACAGCTTTTAGCAGCAAAAGGCGAAGAGACTCTATACGAGAAACATGGTTACCTAGAGGGAATGAGTTGAAGGAACTAGAGAAAGAGAAGGGCATTGTTGTAAGGTTCGTGATCGGGCACAGCAGCACACCAGGGGGAGTTTTGGATAAAGCAATCGATGCAGAAGAGGCAGAACACAAGGACTTCCTGAGGTTAGACCACGTCGAGGGCTATCATGAGCTATCCACCAAGACTCGTCTCTACTTTTCCACCATCACTTCTTTGTGGGATGCTGATTTCTACGTCAAGGTAGACGATGATGTCCACTTAAATCTAGGTACGCTAGTGAGCACACTTGCCAAGTACCGATCAAGACCCAGGGTTTACATTGGTTGCATGAAATCTGGTCCTGTTCTATATCAAAAAGGAGTAAAGTATCACGAGGCTGAGCACTGGAAGTTTGGAGAGGAAGGAAACAAGTACTTCAGGCATGCGACTGGCCAAATATATGCCATTTCCAAGGATCTCGCCACTTATATATCCATCAATTGGCCAATATTGCACAAATATGCAAATGAAGACGTATCTTTAGGTTCGTGGTTACTGGGCCTCGAAGTTGAACATGTGGATGAACGGTCCATGTGTTGCGGAACCCCACCGGATTGTGATTGGAAGGCAAGGACAGGGAATGTGTGTGTGGCATCTTTTGATTGGTCATGCAGTGGTATCTGTAAGTCGGTGGAGAGAATGAAAGAGATACACAAAGCTTGTGGAGAGGGACACGGAGTTGTTTGGAACATTGAACTCTGA 1131 0.4518 MRGKAASGKTILFVCIACFLAGTLFSGQIWTRPSNHENTLQPSTPDCDHKRKLIEGRSVDVMEEVVKTHQAIKYLDKAVSKLEMELTASRRSQSGGKQMRKHNVQKAFVVIGINTAFSSKRRRDSIRETWLPRGNELKELEKEKGIVVRFVIGHSSTPGGVLDKAIDAEEAEHKDFLRLDHVEGYHELSTKTRLYFSTITSLWDADFYVKVDDDVHLNLGTLVSTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEHWKFGEEGNKYFRHATGQIYAISKDLATYISINWPILHKYANEDVSLGSWLLGLEVEHVDERSMCCGTPPDCDWKARTGNVCVASFDWSCSGICKSVERMKEIHKACGEGHGVVWNIEL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02844 376 FunFam Hexosyltransferase 101 322 - -
Vimu5g02844 376 Pfam Domain of unknown function (DUF4094) 7 91 IPR025298 -
Vimu5g02844 376 Pfam Galactosyltransferase 121 317 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu5g02844 376 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 76 320 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu5g02844 376 Gene3D - 96 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02844 Vimu-Chr5 37674920 37677052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02844 4 376 Glycosyltransferase AT1G77810 61.358 4.37e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02844 K20855 - gmx:100776291 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02844 5 37674920 37677052 Vimu5g02844 5 37674920 37677052 ECH