Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02838 ATGGTGTTAGGATTGAGAGAGATACGCTGTAGTGGAGTGCCCGACCTTGACCATGAGAATGGGGAGGAGCTGATGCGGGTACAACCTGGCACAGACATAGTCCTCGGCAACCTTCCTCGAGAATCCCCTGGCACGCTCTACATCACTACCAAGCAAGTAATATGGGTGAATGATGTAGACAAGACTAAAGGGTATGCTGTTGATTTTTTATCCATATCTCTTCATGCTGTCTCTACAGACCCCGAAGCTTACCCTCTTCCTTGTTTGTATACCCAGATTGATACTGAAGAAGCTGATCATGACCACTCTGATTCGGAATCTAATCATATCGAACAAGATTTGTCCAATGTCACAGAAATGAGGCTCATTCCCACTGATCCTACCCAATTGGACGCTCTATTTGCAATATTCTGCCAGTGTGCAGAGCTTAATCCAGAACCGAATGATGATGAAGGAGAAGAAGAACATGACTGGATTTTCAGTGCTGATCAGATGGTAGATGAAGAAGCAGAGGACGAAGGTTATATCTCTCACAATCCAGCCAACTCTATTGGTCAGTCAAATGGAAATCACGACCTTGCTCGTACCATACTTGAGCTTCAAATCAATGATCGAAGATTTGAGGATGCGGAAGAGATGGATGATAATGGAGACGGCACCCATCATTGA 669 0.4484 MVLGLREIRCSGVPDLDHENGEELMRVQPGTDIVLGNLPRESPGTLYITTKQVIWVNDVDKTKGYAVDFLSISLHAVSTDPEAYPLPCLYTQIDTEEADHDHSDSESNHIEQDLSNVTEMRLIPTDPTQLDALFAIFCQCAELNPEPNDDEGEEEHDWIFSADQMVDEEAEDEGYISHNPANSIGQSNGNHDLARTILELQINDRRFEDAEEMDDNGDGTHH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02838 222 PANTHER CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN 11 215 IPR039924 -
Vimu5g02838 222 Gene3D - 16 152 IPR011993 -
Vimu5g02838 222 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 115 127 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Vimu5g02838 222 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 64 78 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Vimu5g02838 222 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 41 56 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Vimu5g02838 222 MobiDBLite consensus disorder prediction 168 189 - -
Vimu5g02838 222 Pfam Regulator of volume decrease after cellular swelling 44 171 IPR039924 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02838 K05019 - gmx:100790816 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02838 5 37643501 37645384 Vimu5g02838 5 37643501 37645384 ECH