Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02835 ATGCCCTCAATGAAAATGACGATGCCAAAACCGAGCATTGCAAGAAGAAAAGCGCTTTCGTTCTTTCCCTCTTCCTTGGCCTTACCCTTTTGTTCCTCCGAAGCAAAAGCAGCGGTAGCAGTGTCCGATAAGCCGAACCCCTTCGGAGCGGAATCATCGTCTGAAGAAGATTCAGAAGAAGGTTTTTGGGATCTAACAGTGATTCTGAAGGTAGGTTTGATGAGAATGGGAGAGAAGACGAGGAAGGTTCTTCTGCAGCTAGATCCGTTTCTCAATGAGCTCACAAGCATGTTTGAGCGCAGCACCGAGAAGGGCTCCGTTTGGGTTACTCTTAAACGATCTTCTTTGAAATCTAAGCTGCAAAGGGATAAACTGGGGACAGCTGGGGAAGCAATTGAGTATAGATGCCTTATACGTGCCACTGATGGGAAAAAGACAATATCTACTTCGGTTGGACCGAAGGATCACCAACGCTTTCAAGCTTCTTATGCAACTATATTGAAGGCCCACATGACTGCCCTAAAGAAGAGAGAAAGGAAAGACAAAAAGAAGCCTGCAGAGGCTGATAAAAGAGAAGGGAGTTCGAAGAGATCGAAGAAGTCTTAA 606 0.4571 MPSMKMTMPKPSIARRKALSFFPSSLALPFCSSEAKAAVAVSDKPNPFGAESSSEEDSEEGFWDLTVILKVGLMRMGEKTRKVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKLQRDKLGTAGEAIEYRCLIRATDGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKPAEADKREGSSKRSKKS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02835 201 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9/1 83 201 IPR009018 GO:0006614|GO:0008312|GO:0048500
Vimu5g02835 201 SUPERFAMILY Signal recognition particle alu RNA binding heterodimer, SRP9/14 83 177 IPR009018 GO:0006614|GO:0008312|GO:0048500
Vimu5g02835 201 MobiDBLite consensus disorder prediction 180 195 - -
Vimu5g02835 201 PANTHER SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN 83 190 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Vimu5g02835 201 MobiDBLite consensus disorder prediction 174 201 - -
Vimu5g02835 201 FunFam Signal recognition particle 14 kDa protein 82 201 - -
Vimu5g02835 201 Pfam Signal recognition particle 14kD protein 85 174 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02835 K03104 - gmx:100526909 188.348