Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02833 ATGCCTTTTTACTTTTTGGGGTTTGCCTCAGGAGGTCCTGGTAGTGGAAAAGGTACGCAATGTGCAAAAATTGTTGAAACCTTTGGATATAAGCATCTGAGTGCTGGAGACCTTTTGAGAAGGGAGATGAGTTCTGATAGTAAATATGGCTCAATGATTCTGAATACAATTAAGGAAGGAAAAATTGTTCCATCAGAAGTTACTGTCAAATTGATTCTAAGAGAGATGAAATCTAGTGACAACCGAAAGTTTCTTATTGATGGTTTCCCTAGAAGCGAGGAGAACCGTATAGCTTTTGAACAAATTATTGGAGCAGAACCTCGGTTTGTACTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGTGTGCTTTGCCGGAATGAGGGTCGAGTTGATGACAATATAGATACAATGAAGAATCGTCTTAAAGTGTTTGAGGCTTTAAGTCTTCCCGTTATTGATTATTATGCTAAGAAGGGGAAACTTTACAGGGTAACTATATTTAGTTTCAATGCTTAA 522 0.3793 MPFYFLGFASGGPGSGKGTQCAKIVETFGYKHLSAGDLLRREMSSDSKYGSMILNTIKEGKIVPSEVTVKLILREMKSSDNRKFLIDGFPRSEENRIAFEQIIGAEPRFVLFFDCPEEEMVKRVLCRNEGRVDDNIDTMKNRLKVFEALSLPVIDYYAKKGKLYRVTIFSFNA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02833 173 Pfam Adenylate kinase 11 161 - -
Vimu5g02833 173 ProSitePatterns Adenylate kinase signature. 84 95 IPR033690 -
Vimu5g02833 173 Gene3D - 7 170 IPR027417 -
Vimu5g02833 173 CDD ADK 11 166 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 Hamap Adenylate kinase [adk]. 10 170 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 PANTHER NUCLEOTIDE KINASE 9 166 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 166 IPR027417 -
Vimu5g02833 173 PRINTS Adenylate kinase signature 131 146 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 PRINTS Adenylate kinase signature 36 50 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 PRINTS Adenylate kinase signature 148 162 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 PRINTS Adenylate kinase signature 8 21 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 PRINTS Adenylate kinase signature 84 100 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu5g02833 173 NCBIfam UMP-CMP kinase family 8 167 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02833 Vimu-Chr5 37610276 37611410 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02833 K13800 - gmx:100806842 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02833 5 37610276 37611410 Vimu5g02833 5 37610276 37611410 ECH