Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02826 ATGAAAGCCACGAAAATTCCTGATATGGTTGTGGCACAAGTGGGCGATCCAAATGCCGACCATGCTTGTTCGGAGAGACCAGAAGACATGGATACTCCTCGAACCTCGTACTTTCTCACTAAACAGAAGCCAGGTTCAGAACTTGCAGCTGAGATTGCAGCTGCACTTGCAGCGTCTTCGATCGCATTTAGGGCAACCGATGCTTCCTATTCCAAAATTCTTCTCAAAAGAGCTATCCTGGATGACTTGGTTTGGGGAGCAGCATGGTTGTATAAAGCAACGAAAATGAATGGTTATTGGGATTTTGTAAAATCAAACATTCAAACAGCGAACGTCAGTCCTTTCGAATTTGGATGGGATGCCAAAGTGGCTGGCATAAACGTTCTCGTTTCTGAGGCGAGTGGATTTATCTTTCATAATTTTTTTTTGTCATGCAAGTTTTGA 444 0.4347 MKATKIPDMVVAQVGDPNADHACSERPEDMDTPRTSYFLTKQKPGSELAAEIAAALAASSIAFRATDASYSKILLKRAILDDLVWGAAWLYKATKMNGYWDFVKSNIQTANVSPFEFGWDAKVAGINVLVSEASGFIFHNFFLSCKF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02826 147 PANTHER ENDO-1,4-BETA-GLUCANASE 2 78 - -
Vimu5g02826 147 Gene3D - 80 140 IPR012341 GO:0005975
Vimu5g02826 147 SUPERFAMILY Six-hairpin glycosidases 6 134 IPR008928 GO:0005975
Vimu5g02826 147 Gene3D - 1 79 IPR012341 GO:0005975
Vimu5g02826 147 Pfam Glycosyl hydrolase family 9 81 133 IPR001701 GO:0004553|GO:0005975
Vimu5g02826 147 Pfam Glycosyl hydrolase family 9 1 78 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02826 Vimu-Chr5 37582281 37583002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02826 4 132 Glycoside Hydrolase AT4G39010 43.293 1.59e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02826 K01179 - zju:107414337 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02826 5 37582281 37583002 Vimu5g02826 5 37582281 37583002 ECH