Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02811 ATGGTTCTGTCTCAGAAGCTTCACGAAGCTTTCAAAGGCACCGTCGAGAGGATCACTGGCCCGCGTACCGTTTCCGCCTTCAAAGAAAAGGGTGTTCTCAGTGTCTCCGAGTTTGTTACCGCCGGCGATAATCTCGTTGCCAAATGCCCCACCTGGGAATCGGGTGAGCCAGGGAAGAGGAAGCCATACTTGCCACCTGAGAAACAGATATTGATCACTAGAAACGTGCCTTGTCTTCGGAGGGCTGCATCTGTTGAAGAAGAATACGAAGCTTCCGGAGGGGAAGTTTTGCTTGATGGTGATGATAATGATGGCTGGCTAGCAACTCATGGGAAACCTAAAGAAAACAAATCTGATGAGGACGATAATTTACCTTCCATGGAAAGCCTAGAAATCAGCAAAAAGAGTTCTATTAAGCAAATTCCTTCTTACATGGGAGCTGAGGATGACGACGATATTCCGGATATGGCAGACTTTGATGATAATTGCAATGTTATTGAAAATGATCCTTCCACGTATCTAGTAGCTCATGAACCTGATGACGATAATATTCTACGAACCCGAACTTATGATGTCAGCATCACGTATGATAAATATTATCAAACACCACGAGTATGGCTTACTGGGTATGATGAGGCAAGAATGCTTTTGCAACCAGAACTTGTCCTTGAAGATGTTAGTCAAGACCATGCTCGCAAAACGGTAACAATTGAAGACCATCCTCACTTGCCTGGGAAGCATGCATCTATTCATCCATGTCGACATGGAGCAGTGATGAAGAAAATCATTGATGTCTTGATGTCACGTGGGGTTGAGCCTGAAGTTGACAAGTACCTATTCTTATTCCTAAAATTTATGGCTTCTGTAATTCCAACAATTGAGTACGATTACACCATGGACTTTGATCTTGGTAGCTCCAGCAATTGA 927 0.438 MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWESGEPGKRKPYLPPEKQILITRNVPCLRRAASVEEEYEASGGEVLLDGDDNDGWLATHGKPKENKSDEDDNLPSMESLEISKKSSIKQIPSYMGAEDDDDIPDMADFDDNCNVIENDPSTYLVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEARMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02811 308 FunFam Autophagy-related protein 3 156 293 - -
Vimu5g02811 308 Gene3D - 153 293 - -
Vimu5g02811 308 MobiDBLite consensus disorder prediction 105 128 - -
Vimu5g02811 308 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 5 302 IPR046962 GO:0019776
Vimu5g02811 308 Pfam Autophagocytosis associated protein, active-site domain 37 297 IPR007135 GO:0019787
Vimu5g02811 308 MobiDBLite consensus disorder prediction 93 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02811 K08343 - gmx:100814257 566.614