Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02799 ATGAAACATCTTCGCGACAAGTACTCTGAAAATTTCGTTTGTGTATCGATGAAGAAGGAGAAAGAAAAGGAAGTGGTTGTGGGTTCACCTGCGAGTGGCGAAGACATCGACGATAAGCAACGGCCTGCCTTTCCCTCCGTCAGATTCTCTACCCGCAACGCTTCCTCCAAATACGATTTCGTCAAGGTTAAGGTGTGGTTGGGTGATAATGCGGATCACTACTACGTTCTCTCCAGATTTTTGCTCAGCAGGATGCTTACGGTTACCAAGATTCCAAACCATGTAGCTATCAAAATTGCCCTCGAGCTGAAGAAGCTGCTCATAGACAACAGCCTTCTAGATGTCTCTCAATCTGATTTGGAGGTTAACCTATTTAAGCTTATGGAGCGGCGGGGATACGGAGATGAGTACATCAATCGCTACAAGATGATGACGAGATTTCACCACCAAAGAGTTCCATTAGTAATCCTTGTCTGTGGAACTGCTTGTGTTGGGAAGTCTACTATGGCCACTCAGCTTGCACAGAGGCTAAACTTACCAAATGTATTACAGACAGATATGGTGTATGAATTGTTGCGCACATCAACAGATGCACCATTGGCATCAATTCCTGTATGGGCTAGAGAATTTGGTTCGCCAGAGGAGTTAATAACTGAGTTTTGCAGAGAATGCAGGGTTGTTCGCAAAGGTTTGGCTGGTGATCTGAAGAAGGCAATGAAAGATGGGAAACCAATTATAATTGAGGGAATGCATTTGGATCCTAGCATTTATTTAGTGGACGATGAGAATAAGTCACCTTCTGGTGTACATTCAGAAAACAAAGAGATAAATCCAGTCGTTGTGACTTTGGATGATAATGCTACCATACAATTAAAAGATTTACATGTGGGTAGCAGTGATGAGACTAATGAAGGAGTATCTGCTGATCAGATTGAAGCAGTATCAAATTCTATAACATCCATGGGTCTTTCTGTTAGTATCCCTGGGCAAAAAGTTGCTTCTCTTAGGGAACTGGAGACTGACAAAACTACCATTAGTAAGAAGAAATCAGGCCCCAAACCAATAATTGTGCCTATTGTGTTGAAGATGGCTGAATTTGATCACAAGGCATTACTTGAGGAATGGATCTCCAGCAGAACATTTTCTGACAAATGTCCAGATCTGGATAATGAGAAACTTATGGCCAATTTGAAAACCATGCAGGATTATCTCTGCTCGTTCACATCACAGGGGTTGACTGTGGTCAACGTATCGGCAACAACATTTCCTCAAACATTGGATTGGTTGCATGGTTACCTTCTTCAGTGCATCGAGCAAGGTATCAATGAAAATGGTACAACACAAGTAGCTGCAGCATAA 1359 0.4238 MKHLRDKYSENFVCVSMKKEKEKEVVVGSPASGEDIDDKQRPAFPSVRFSTRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEVNLFKLMERRGYGDEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTMATQLAQRLNLPNVLQTDMVYELLRTSTDAPLASIPVWAREFGSPEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGMHLDPSIYLVDDENKSPSGVHSENKEINPVVVTLDDNATIQLKDLHVGSSDETNEGVSADQIEAVSNSITSMGLSVSIPGQKVASLRELETDKTTISKKKSGPKPIIVPIVLKMAEFDHKALLEEWISSRTFSDKCPDLDNEKLMANLKTMQDYLCSFTSQGLTVVNVSATTFPQTLDWLHGYLLQCIEQGINENGTTQVAAA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02799 452 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 42 443 - -
Vimu5g02799 452 Gene3D - 155 321 IPR027417 -
Vimu5g02799 452 Pfam AAA domain 156 286 - -
Vimu5g02799 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 259 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02799 - - gmx:100812099 747.273