Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02797 ACAAAGGGAGAAAAACTTGATGGTTTTGTGTGTATATTTGTACATGTGCAGATGGGTTATAGGCATTTTGACACAGCAAAAATATATGGTTCTGAGCCAGCACTGGGCAAGGCCTTGAATGAGGCAATCTGCGAGGGAGTAGTGGAGAGAGAAGACATTTTCTTAACGTCAAAACTGTGGGGGAGTGATCACCATGATCCTGTTTCTGCATTAAAACAAACTCTAGAGAATCTGGGTATGGAGTACCTAGACATGTACCTAGTGCACTGGCCAGTGAAATTGAAGCCATGGGTTAACTACCCTGTACCTAATGAAGATGACTTTGAAAAGTTGGAGCTTGAGAACACATGGGCAGGGATGGAGAAATGCCTTGAAATGGGGTTGTGTAGGTGCATTGGGGTTAGTAATTTCTCTAGCAAGAAGATTGAGTCCTTATTGGATTATGCTTCTACAACTCCAGCTGTAAATCAGGTGGAAATGCATCCAATGTGGAGGCAAGAAAGGCTTAGAAAGACCTGTGGGGACCACAAGATCCATGTGAGTGCTTATTCACCACTTGGTGGACCAGGGAATGCATGGGGGTCAACGGCTGTGGTTAATCACCCTATCATCACATCAATTGCTCTCAAACACAGAGCAACTCCAGCACAGGTTGCATTGAATTGGGGACTATCAAAGGGCTCAAGTGTGATTGTCAAAAGCTTCAATCAAGAAAGAATGAGGGAAAATATGGGATCGTTTGATCTTAGATTGGATGATGAAGATATGTTGGAGATTGAGAAATTGGAGGAAATGAAGATTATGAGGGGGGAGTTTCACGTTAATGAAACCACGAGTCCCTACAAAACCATTGAAGAACTTTGGGACGGTGAAATTTGA 879 0.4312 TKGEKLDGFVCIFVHVQMGYRHFDTAKIYGSEPALGKALNEAICEGVVEREDIFLTSKLWGSDHHDPVSALKQTLENLGMEYLDMYLVHWPVKLKPWVNYPVPNEDDFEKLELENTWAGMEKCLEMGLCRCIGVSNFSSKKIESLLDYASTTPAVNQVEMHPMWRQERLRKTCGDHKIHVSAYSPLGGPGNAWGSTAVVNHPIITSIALKHRATPAQVALNWGLSKGSSVIVKSFNQERMRENMGSFDLRLDDEDMLEIEKLEEMKIMRGEFHVNETTSPYKTIEELWDGEI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02797 292 FunFam NADPH-dependent codeinone reductase 1-1 6 292 - -
Vimu5g02797 292 SUPERFAMILY NAD(P)-linked oxidoreductase 12 262 IPR036812 -
Vimu5g02797 292 PIRSF AKR 4 286 IPR020471 GO:0016491
Vimu5g02797 292 Pfam Aldo/keto reductase family 16 263 IPR023210 -
Vimu5g02797 292 PANTHER ALDO/KETO REDUCTASE 16 264 - -
Vimu5g02797 292 Gene3D - 11 292 IPR036812 -
Vimu5g02797 292 PRINTS Aldo-keto reductase signature 154 183 IPR020471 GO:0016491
Vimu5g02797 292 PRINTS Aldo-keto reductase signature 120 137 IPR020471 GO:0016491
Vimu5g02797 292 PRINTS Aldo-keto reductase signature 15 39 IPR020471 GO:0016491
Vimu5g02797 292 PRINTS Aldo-keto reductase signature 198 222 IPR020471 GO:0016491
Vimu5g02797 292 PRINTS Aldo-keto reductase signature 73 91 IPR020471 GO:0016491
Vimu5g02797 292 ProSitePatterns Aldo/keto reductase family signature 1. 19 36 IPR018170 GO:0016491
Vimu5g02797 292 ProSitePatterns Aldo/keto reductase family signature 2. 120 137 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02797 Vimu-Chr5 37410676 37412140 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02797 - K00002 gmx:100786497 537.339