Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02786 ATGGGTGTTGTGGAGGGTCTCTTAGCTTTAGCTTTGGTTCTGAATGCTGTTGTGGTGTGTAATGGAGGCTCAAGCAGCCTCTTCACTAGGAAAACCGAGAAGACTGTGGATATGCCACTTGACAGTGATGTGTTTTCCGTTCCTCCTGGTTATAATGCTCCTCAGCAAGTACATACTCTACCCTCTTCTTCTCCTGTGTCATGGGTGACGATGGATGAACCGGGGTCGAGTGCAGTGCGTTACTGGAGTGAGAACAGTGGGGAGAAGAAGATTGCAGAAGGAAAAATTGTCACTTATAGTTTCTTCAATTACTCATCTGGGTTTATTCATCACACCACCATCAGAGATTTAGAGATGCAGAACAAGGAAGAGAAGCTTTACAACACCAAATACTACTACGAAGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTAACTCCACCTGAAATTGGACCTGATGTACCATACACATTTGGTCTTATAGGGGATCTCGGTCAGAGTTTTGATTCAAATGTGACTCTTTCTCACTATGAATTGAGTCCAAGAAAAGGAGAAACTGTACTGTTTGTTGGAGACCTCTCTTATGCTGATAACTACCCGAATCATGATAATGTGAGGTGGGATACTTGGGGAAGGTTTACAGAAAGAAGTGTTGCATATCAACCATGGATTTGGACTGCAGGCAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACCGTACCTTTCAAGCCTTTCACCCACCGTTACCATGTTCCATACAAAGCATCTCAGAGCACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGTCCTCATATTCTGCATATGGCAAATATACGCCACAATATACATGGCTTGAACAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTACAATAGCTACAATTATCACTACATGGAGGGAGAAACAATGAGAGTAATGTACGAAGCCTGGTTTGTGAAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTACGAACGATCTGAACGTGTTTCTAACATTGCATACAACGTTGTGAATGGCATTTGCACTCCTATAAAAGATCAATCAGCCCCTGTATATATCACCATTGGTGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAACCTGAGTATTCTGCATACCGAGAAGCGAGCTTTGGACATGCCATGTTTTCCATAAAGAACCGAACGCATGCTCACTACAGCTGGAACCGAAATCAAGATGGTCTCGCTGTGGAGGCTGATTCCGTTTGGTTTTTCAACCGATACTGGCACCCAGTTGATGATTCCACCGTTCATGGTTATAAGGTTCATTCGGTCAACTTCAATGGTGTGAACGCCATTCCCCAGTCTATTCTCAACCATATGCTGCAACCTCTATCTTCAAAGTCAACTTTTTCAGTCAACGTCAACATAGAGAGAGAACTCAAAGAAATTATTACACATGCACGATGTGACATAGGAACACGGATCCTTGAACATTACTGCTATAGATATTTTATCATTATTACTGTTATCAGTCACTGCCAACTAAACCGCAAGAAAACCACGGACAACGTTTTCAAGCTTCATGTCCCATTCGAAATGGGTGTTGTGGAGGGTCTCTTAGTTTTAGCTTTGGTTTTGAATGTTGTTGTGGTGTGTAATGGAGGCACAAGCAGCCTCTTCGTTAGGAAAACCGAGTTATCTAGGGATATGCCAATTTACAGTGATGTATTTTCTGTTCCTCCTGGTTATAATGCTCCGCAGCAGGTTCATATAACGCAAGGTGACTATGTGGGGAGGGGGATGATAGTGTCATGGGTGACGATGGATGAACCGGGGTCGACTGCAGTGCGTTACTGGAGTGAGAACAGTGGGAAGAAGAAGATTGCAGAAGGAAAAATTGTCACTTATAGGTTCTTAAATTACTCATCTGGGTTTATCCATCACACCACCATCAGACATTTGGAGATGCAGAACAAGGAAGAGAAGCTTTACAACACCAAATACTACTACGAAGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTAACTCCACCTGAAATTGGACCTGATGTACCATACACATTTGGTCTTATAGGGGATCTTGGTCAGAGTTTTGATTCAAATTTGACGCTTTCTCACTATGAATTGAGTCCAAAAAAGGGACAAACTGTACTGTTTCTTGGAGACCTCTCCTATGCGGATCAGTACGAGAATCATGATAATGTGAGGTGGGATACTTGGGGAAGGTTTACAGAAAGAAGTGTTGCATATCAACCATGGATTTGGACTGCAGGGAACCATGAACTTGATTATTATCCAGAAATTGGTGAAACCGTACCTTTCAAGCCTTATTCCCATCGTTACCATGTTCCATACAAAGCATCTCAGAGCACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGTCCTCATATTCAGCATATGGCAAATATACGCCACAGTATAGATGGCTTGAACAAGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATGCACCTTGGTACAATAGCTACAATTATCACTACATGGAGGGAGAAACAATGAGAGTAATGTTCGAAACCTGGTTTGTGGAGAACAAGGTTGATGTTGTGTTTGCTGGTCATGTGCATGCTTATGAACGATCTGAACGTGTTTCTAACATTGCATACAACGTTGTAAATGGCATTTGCACTCCTGTAAAAGATCAATCAGCTCCTGTATATATCACCGTTGGTGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAACCTGAGTATTCTGCATACAGAGAAGCCAGCTTTGGACATGCCATATTTTCCATAAAGAACAGAACGCATGCTCATTACAGCTGGAACCGAAATCATGATGGAATTGCTGTGGAGGCTGATTCCGTTTGGTTTTTCAATCGATACTGGCACCCAGTTGATGATTCCACTGTTCATGAATGA 3090 0.4275 MGVVEGLLALALVLNAVVVCNGGSSSLFTRKTEKTVDMPLDSDVFSVPPGYNAPQQVHTLPSSSPVSWVTMDEPGSSAVRYWSENSGEKKIAEGKIVTYSFFNYSSGFIHHTTIRDLEMQNKEEKLYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNVTLSHYELSPRKGETVLFVGDLSYADNYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPFTHRYHVPYKASQSTSPFWYSIKRASAHIIVLSSYSAYGKYTPQYTWLEQELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPIKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAYREASFGHAMFSIKNRTHAHYSWNRNQDGLAVEADSVWFFNRYWHPVDDSTVHGYKVHSVNFNGVNAIPQSILNHMLQPLSSKSTFSVNVNIERELKEIITHARCDIGTRILEHYCYRYFIIITVISHCQLNRKKTTDNVFKLHVPFEMGVVEGLLVLALVLNVVVVCNGGTSSLFVRKTELSRDMPIYSDVFSVPPGYNAPQQVHITQGDYVGRGMIVSWVTMDEPGSTAVRYWSENSGKKKIAEGKIVTYRFLNYSSGFIHHTTIRHLEMQNKEEKLYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNLTLSHYELSPKKGQTVLFLGDLSYADQYENHDNVRWDTWGRFTERSVAYQPWIWTAGNHELDYYPEIGETVPFKPYSHRYHVPYKASQSTSPFWYSIKRASAHIIVLSSYSAYGKYTPQYRWLEQELPKVNRTETPWLIVLMHAPWYNSYNYHYMEGETMRVMFETWFVENKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITVGDGGNLEGLATNMTEPQPEYSAYREASFGHAIFSIKNRTHAHYSWNRNHDGIAVEADSVWFFNRYWHPVDDSTVHE 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02786 1029 Pfam Iron/zinc purple acid phosphatase-like protein C 383 442 IPR025733 -
Vimu5g02786 1029 Pfam Iron/zinc purple acid phosphatase-like protein C 947 1006 IPR025733 -
Vimu5g02786 1029 CDD MPP_PAPs 154 452 IPR041792 -
Vimu5g02786 1029 Pfam Purple acid Phosphatase, N-terminal domain 613 712 IPR015914 GO:0003993|GO:0046872
Vimu5g02786 1029 Pfam Purple acid Phosphatase, N-terminal domain 61 148 IPR015914 GO:0003993|GO:0046872
Vimu5g02786 1029 SUPERFAMILY Purple acid phosphatase, N-terminal domain 596 714 IPR008963 GO:0003993|GO:0046872
Vimu5g02786 1029 Pfam Calcineurin-like phosphoesterase 723 921 IPR004843 GO:0016787
Vimu5g02786 1029 Pfam Calcineurin-like phosphoesterase 159 357 IPR004843 GO:0016787
Vimu5g02786 1029 Gene3D - 53 152 - -
Vimu5g02786 1029 Gene3D - 612 716 - -
Vimu5g02786 1029 PANTHER ACID PHOSPHATASE RELATED 568 1015 IPR039331 GO:0003993
Vimu5g02786 1029 SUPERFAMILY Metallo-dependent phosphatases 154 461 IPR029052 -
Vimu5g02786 1029 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 150 IPR008963 GO:0003993|GO:0046872
Vimu5g02786 1029 Gene3D - 717 1026 IPR029052 -
Vimu5g02786 1029 Gene3D - 153 462 IPR029052 -
Vimu5g02786 1029 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 53 152 - -
Vimu5g02786 1029 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 612 716 - -
Vimu5g02786 1029 SUPERFAMILY Metallo-dependent phosphatases 718 1025 IPR029052 -
Vimu5g02786 1029 CDD MPP_PAPs 718 1016 IPR041792 -
Vimu5g02786 1029 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 717 1025 - -
Vimu5g02786 1029 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 153 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02786 Vimu-Chr5 37350754 37357245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02786 114 440 Miscellaneous Gene Families AT1G13900 26.121 2.16e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02786 K22390 - gmx:100815854 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02786 5 37350754 37357245 Vimu5g02786 5 37350754 37357245 ECH