Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02785 ATGGGTGTTGTGGAGGGTCTCTTAGCTTTAACTTTGGTTCTGAATGTGGTTGTGGTGTGTAATGGAGGCTCGAGCAGCTTCTTCGTTAGGAAAACAGAGAAATCTGTGGATATGCCACTTGACAGTGATGTATTTTCTGTTCCTCCTGGTTATAATGCTCCTCAGCAGGTTCATATAACGCAAGGTGACCTTGTGGGGAGGGGGATGATAGTGTCATGGGTGACGATGGATGAACCGGGGTCGAGTGCAGTGCGTTACTGGAGTGAGAACAGTGGGGAGAAGAAGATTGCAGAAGGAAAAATTGTCACTTATAGTTTCTTCAATTACTCATCTGGGTTTATTCATCACACCACCATCAGAGATTTAGAGATGCAGAACAAGGAAGAGAAGCTTTACAACACCAAATACTACTACGAAGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTAACTCCACCTGAAATTGGACCTGATGTTCCATACACATTTGGTCTTATAGGGGATCTTGGTCAGAGTTTTGATTCAAATGTGACTCTTTCTCACTATGAATTGAGTCCAAGAAAAGGAGAAACTGTACTGTTTGTTGGAGATCTCTCTTATGCTGATAACTACCCGAATCATGATAATGTGAGGTGGGACACTTGGGGAAGGTTTACAGAAAGAAGTGTTGCATATCAACCATGGATTTGGACTGCAGGCAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACCGTACCTTTCAAGCCTTATACCCATCGTTACCATGTTCCTTACAAAGCATCTCAGAGCACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCGGCACACATCATTGTCTTGTCCTCATATTCAGCGTATGGTAATACCCTCCAACGCAAATATACGCCGCAATATAAATGGCTTGAACAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCCTGGTTAATTATTCTCATGCATTCACCTTGGTACAATAGCTACAATTATCACTACATGGAAGGAGAAACAATGAGAGTAATGTACGAAACCTGGTTTGTGAAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTACGAACGATCTGAACGTGTTTCTAACATTGCATACAACGTTGTAAATGGCATTTGCACTCCTGTAAAAGATCAATCAGCTCCTGTATATATCACCGTGGGTGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAACCTGAGTATTCTGCATACCGAGAAGCCAGCTTTGGACATGCCATATTTGCCATAAAGAACCGAACGCATGCTCACTACAGCTGGAACCGAAATCAAGATGGTCTCGCTGTGGAGGCTGATTCCGTTTGGTTTTTCAACCGATACTGGCACCCAGTTCATGATTCCATCGCTCATGTTTCACATTAA 1434 0.4317 MGVVEGLLALTLVLNVVVVCNGGSSSFFVRKTEKSVDMPLDSDVFSVPPGYNAPQQVHITQGDLVGRGMIVSWVTMDEPGSSAVRYWSENSGEKKIAEGKIVTYSFFNYSSGFIHHTTIRDLEMQNKEEKLYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNVTLSHYELSPRKGETVLFVGDLSYADNYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLSSYSAYGNTLQRKYTPQYKWLEQELPKVNRTETPWLIILMHSPWYNSYNYHYMEGETMRVMYETWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITVGDGGNLEGLATNMTEPQPEYSAYREASFGHAIFAIKNRTHAHYSWNRNQDGLAVEADSVWFFNRYWHPVHDSIAHVSH 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02785 477 SUPERFAMILY Purple acid phosphatase, N-terminal domain 35 155 IPR008963 GO:0003993|GO:0046872
Vimu5g02785 477 CDD MPP_PAPs 159 462 IPR041792 -
Vimu5g02785 477 SUPERFAMILY Metallo-dependent phosphatases 159 471 IPR029052 -
Vimu5g02785 477 Gene3D - 53 157 - -
Vimu5g02785 477 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 53 157 - -
Vimu5g02785 477 Pfam Iron/zinc purple acid phosphatase-like protein C 393 452 IPR025733 -
Vimu5g02785 477 Pfam Purple acid Phosphatase, N-terminal domain 54 153 IPR015914 GO:0003993|GO:0046872
Vimu5g02785 477 Gene3D - 158 472 IPR029052 -
Vimu5g02785 477 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 158 471 - -
Vimu5g02785 477 Pfam Calcineurin-like phosphoesterase 164 367 IPR004843 GO:0016787
Vimu5g02785 477 PANTHER ACID PHOSPHATASE RELATED 11 461 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02785 Vimu-Chr5 37345730 37348514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02785 41 450 Miscellaneous Gene Families AT1G13900 24.733 1.47e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02785 K22390 - gmx:100815854 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02785 5 37345730 37348514 Vimu5g02785 5 37345730 37348514 ECH