Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02782 ATGGTTATGGAGGTAGATTTGAATTCGCAGTGCAACTGGACCATTCCTTCCTCAGCCTCTATCAGCGACACCATCACTTTCCAATCCTCTTACTGTCTCCTCAGCGACGATAACCGAACTGATCCCACTCCTCTTCTTCTTCATTCTCCTTCGCCAGATTCTCCTCCTTGCGAGATCAAGATTACTTTTCCGGAGAAGCACGAGCTCAGACAAATCTACGTTCGGAGCACTGCTCGCGTCTACGAGATTTACTTTGCGCCCAACGCTCGCACTAACAATGAATATCTCTGCACTGTCCGATGCGGTCTTGCTGTTAGAGACGATCACGTTCTTCGTTCCCCCGCTGTCCAAAATTTAGGTGGTGACGACAATGTTAAAACTGAAGATGATTGGGTTGAGGTCAAAGTTCCTGATTCTCCTCACATCGCTTCGGAAACAAAACCCTACCTCAATTCCATTAAAACATATCAGTCTCAGGATCTTTATGAGGCTACCGCAGAGATTGATGATGCAAATCCTTGCATTTCTGTTACTATTCGGCTGCTCTCGCTTCAGAATAAAGGATGTGTTTATGTTGATGAGATTTATGTTTTTGCTGATCCTGTTGATTCAGCCGATTCAGAAAGCCAAGAAAAGCCTTATGAAAACTCATCCGGCAGTTCCCTCATGGCTATGTTTATCCCCACTTTAATGCAATTATCTAAGACAACAGGGCTCAACGATCTAAATGCTCTCAGAAAGGAAAAGTCCCTTGTTCAGGGGGATGATTTGGAAGCAACCCTCTCTAGTGATTCTATAATTAAAACCCAGGTGATAGGAAACACTAGCATAACTGATCCCCAAGAAGTGAAGTTGAAGGAGGTAGAAGGAGGTTGGGTGGGTCCATCCCAGCCAGATGTCATCCCACAACTTGCTAAAATCGAGAGTAACCCTGTTGCAGTACCCTCCCAAACTGCCAAAATGGACAGCACTTGCACAGTTGTACCCTCAAAAATTGCTGAAATGGAGAACAACCATAGTGCTGTTCCCTTTGAATTTACTAAAATGGAGTGCAACCGTAGTTCTGTCCCCTCACAAGTTGGTATTCCTGAAAGCAAAGGTGGTTTTTCTTTGGGTTACAATGTTGAAAGGCTCCTGGAACAGCTTGTATCACGCATGGACAGGATAGAAGAAATCTGTTTGGGCTTTCAAGAGAAAATGGTAGTGCCCATGAGCAGCATGGAGGTGAGACTTCAAAGAGTTGAACAGCAAGTGGACACATTGACTAAGAATTTGCAGAACTCTGCATTGCCATCACATTGTAAGATTTTCTCTCCTGATGCTTCTTGTATTGAATCAGATGCCAACACCAGCGATTGTCCTGATTATCTGGTGACTAGGGAAAGTGAACCAGATGAGAATCATTTACACGCAGAGATACCACATGTCTCTTCTCCTCCTAATAGTTCTGATTCAGGAAATATTTCAAGATTGCTCCCAGGTCTTGTAGTTACGGCACCTGAGTTTCCCGATGGCGAGGATGAAGAAGATAATGCATCAGGTCAAGAAACAAGTTCTTTGAAAGATAAAGGAAAGCACACAATTGATGATGCCTTATCTTCTGCATTGGCTAATTTTTTGTCTTCTGTATCGATGGGCTCTCCAAAGTATACGAAAAGTCTGACTGTTAAAGCCCCTGAGTTTTTAAATGAAGATGATGATGATGACCATGGGAGCAGTAGTGAGATAGCAAAAAATGACTCAGTTTGTCTTGCAGAAAGTGAGGAATTTAGTCACGTCCAAGTGTTGGCTTCATCTAATACTTTGGAAAATGGTGAGAAGATAAACCCAGATTCTACTTATAAACAATCTGAAAAGACTGCCCAGGAAGCTGTAGAAGATGGACAACTTGACATTGCTAGAGGAGATCAAGAAGAGGTGCATGTGAAAACTAATAGTTTAACTGAACACAATCCTGAAACAGGTTTTATTGACAACTCTGAAGAAGATAATAATGGAAAAATCAATGCTCATAAAAGTGATGGTTTGCTCGACAATCAGACTCCATATTGTTATAGCATCACCGAGGAAGGACCGACTTCAGGAACTGAAGATACTGTTGCAAGAGGGGTACCTAGAAAGGCCTCCCACGAGAATATCTTAAAGAACGTTCTTGGATTTTCAGTAGGTTCCTCTGTTGTAGATTTTGAAAATCCAATCTTGGACGTGAAATTTATTTCTCAGAGAAGTCCTGCCACTGATCGTTTCCTTGAAGAGCTTCTTCAAGTTGATACACAAGAAACCACCAGTTCAGTAGATCCCTCTGTCAAGGAAAGCAATATTGATCTTTCCGTTGAGGAACAACCGAAAAGAAATGATGTCTCAGTTGAGGAGCAGTCAAATTTGATTTCAATAGATGAGGAACCAGCGAATCTAGTTAGCGACAGTCATTTTGCTGTGGACTTAGACTTGTGTACTTCGATACCTGTGAACATTGACGACGATAACCTGCCTCTGCCTGAGGATCATAAACGAAAACGTGATCAAGTAATTTGGTCAAGTAGCGTATGA 2550 0.4235 MVMEVDLNSQCNWTIPSSASISDTITFQSSYCLLSDDNRTDPTPLLLHSPSPDSPPCEIKITFPEKHELRQIYVRSTARVYEIYFAPNARTNNEYLCTVRCGLAVRDDHVLRSPAVQNLGGDDNVKTEDDWVEVKVPDSPHIASETKPYLNSIKTYQSQDLYEATAEIDDANPCISVTIRLLSLQNKGCVYVDEIYVFADPVDSADSESQEKPYENSSGSSLMAMFIPTLMQLSKTTGLNDLNALRKEKSLVQGDDLEATLSSDSIIKTQVIGNTSITDPQEVKLKEVEGGWVGPSQPDVIPQLAKIESNPVAVPSQTAKMDSTCTVVPSKIAEMENNHSAVPFEFTKMECNRSSVPSQVGIPESKGGFSLGYNVERLLEQLVSRMDRIEEICLGFQEKMVVPMSSMEVRLQRVEQQVDTLTKNLQNSALPSHCKIFSPDASCIESDANTSDCPDYLVTRESEPDENHLHAEIPHVSSPPNSSDSGNISRLLPGLVVTAPEFPDGEDEEDNASGQETSSLKDKGKHTIDDALSSALANFLSSVSMGSPKYTKSLTVKAPEFLNEDDDDDHGSSSEIAKNDSVCLAESEEFSHVQVLASSNTLENGEKINPDSTYKQSEKTAQEAVEDGQLDIARGDQEEVHVKTNSLTEHNPETGFIDNSEEDNNGKINAHKSDGLLDNQTPYCYSITEEGPTSGTEDTVARGVPRKASHENILKNVLGFSVGSSVVDFENPILDVKFISQRSPATDRFLEELLQVDTQETTSSVDPSVKESNIDLSVEEQPKRNDVSVEEQSNLISIDEEPANLVSDSHFAVDLDLCTSIPVNIDDDNLPLPEDHKRKRDQVIWSSSV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02782 849 MobiDBLite consensus disorder prediction 498 523 - -
Vimu5g02782 849 MobiDBLite consensus disorder prediction 597 619 - -
Vimu5g02782 849 MobiDBLite consensus disorder prediction 597 624 - -
Vimu5g02782 849 Coils Coil 404 424 - -
Vimu5g02782 849 PANTHER 40S RIBOSOMAL PROTEIN S27 4 839 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02782 - - gmx:100810497 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02782 5 37328883 37332279 Vimu5g02782 5 37328883 37332279 ECH