Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02768 ATGGGCCGATTAACAGGTGTAGTAGAACAAGGGCGATTGAATCCCCATGAACAGAACCACGAAGACGACGGGACCCAACGAAGCGGCGACAGATCTACGATCACGAAGAAGCAACAAACGATGGAGCCTTTGCTGCAATTCGCACCGATGCAGAGCTCCGTCGACGAGGGTTTCTGGCACCGATTGTCTTCCTTGAAGCTTAACAAGCTTGGCATTGACGATTCTCCAATTCACATATTCGGTTCATCTCTTTACTTTCGCTTTTATGCACCTTGCTCTCACTCTCAAGTATCAAATCATTTAACTGTTTTATCCGAGTCTTTACCTTCTGAGTTGAGCGAGGCATCGTTAATTCCAGAACCGAGCCGCGGCAACCGGAACAGGTGCTCTGTTCCGGGGATACTTTACAATACGAATACTGTGGAGAGCTTCCATGCACTTGATAAGCAGGACCTGCTGAAGAAAGAAGCAGCAAAGATATGGGATGATATTCAAACTGGAAAAGCTGTGGAGGACTGTTCAGTACTTTCGAGATTCCTTGTTATTTCTTTTGCTGACCTGAAAAAGTGGACTTTCAACTATTGGTTTGCTTTCCCTGCTCTCATGCTTGATCCTCCAGCAACTGTGGTTAATCTGAAGCCAGCTTCTCAGTGGTTCAGCGCAGCCGAGGCTGAATCCCTCTCTGCAGCGTGTAACGAGTGGCGCAGCTCAAAATCAACAGCAGATGTCCCATTCTTTTTAGTCACCATAGATCAACACTCATGCGCTACTGTTAGGCTTCTGAAGGACTGGGAAGCTTGTCAAGGCAATGGTAACAAGATCTTTTTTGGATTTTATGATCCATGTCATCTCCCAAATAATCCTGGATGGCCTCTTCGCAACTTCTTAGCACTTATTTCTGTGAGGTGGAATCTCAACTCAATTCAATTTTTCTGCTACAGAGAGAACCGTGGTTTTGCAGATATGAAGTTGTCTCTTGTTGGTGAAGCATTGATAACAGTTCCACAAGGGTGGAAAGACACAGTGCCCAGTGCAGTTGGATGGGAACTTAATAAGGGGAGAAAAGCTTCTAGGTGTATAAGCCTTGCACAGTCCATGGATCCAACCAGATTGGCCATATCTGCTGCAGATTTGAATTTAAAGCTTATGAGGTGGCGTGCTTTGCCATCTCTTGACTTGAATGCCTTATCTTCCATGAAGTGTCTTCTCCTTGGGGCTGGCACACTTGGATGCCAGGCATGGGGTGTTCGAAAAATTACTCTAGTTGACAATGGTAGGGTGGCTATGTCTAACCCATTGAGGCAGTCTCTTTATACTTTGGATAACTGTCTTAATGGTGGTGAATTTAAAGCTACTGCAGCAGTTGAAAGTCTCAAACGGATATTTCCAGCAGTGGAAGCAGAAGGTATTGTTATGGCTATACCAATGCCTGGACATCCCATACAAAGCCAGGAACACGATAGTGTGCTTGATGATTGTAAAAGGTTGCGTGATTTAATTGAGGCTCACGATTCAGTTTTTTTGTTAACCGATACAAGGGAAAGTAGATGGTTGCCAACACTTCTCTGTGCCAATACTAACAAGATTACCATTACTGCTGCACTAGGGTTTGACAGTTTCTTGGTTATGCGCCATGGAGCTGGTCCTTTAAGTCAGGCCCACAAGTTGAATGCTGAAATCATTAATTCTTCATCTGTTGATATGCCAGTAAATGATGCAAATGGAAATCATAGATTGGGCTGTTATTTCTGCAGTGATGTTGTTGCACCTACCGATTCAACGTCCAACCGAACATTGGACCAACAATGTACAGTGACCCGACCAGGGCTGGCTCCTATTGCTTCAGCCCTTGCAGTTGAACTTCTAATCGGGATTTTGCATCATCCTCAAGGGATATTTGCAGTAGGTGACATTAACAACAATGTCGATCGAGCTACTGAGCAACCTCTTGGTATTTTACCTCATCAGATTCGTGGCTCCCTTTCTCAATTTTCTCAAATGACTCTTATAGGTTATTCCTCCGCCAGCTGCACTGCCTGTAGTCAAACATTATTTGATAATGCTTCCTCTGCAATTAGTAGTGATCTGGATGTGTTGCCTATAACGCCTGGGCATGAAACCGTTGTATCAGAATATCAAAACCAAGGAATGGAGTTCATATTTCAAGCAATTAATCATCCCACTTACCTAGAGGATCTCACTGGACTGACAGAGTTGATGAAATCAGCCACCTCCTTGGATTGGGACAGGGAGATAGACGAGGAGGATGAAGACTGCGTTGAAATTTAA 2289 0.4439 MGRLTGVVEQGRLNPHEQNHEDDGTQRSGDRSTITKKQQTMEPLLQFAPMQSSVDEGFWHRLSSLKLNKLGIDDSPIHIFGSSLYFRFYAPCSHSQVSNHLTVLSESLPSELSEASLIPEPSRGNRNRCSVPGILYNTNTVESFHALDKQDLLKKEAAKIWDDIQTGKAVEDCSVLSRFLVISFADLKKWTFNYWFAFPALMLDPPATVVNLKPASQWFSAAEAESLSAACNEWRSSKSTADVPFFLVTIDQHSCATVRLLKDWEACQGNGNKIFFGFYDPCHLPNNPGWPLRNFLALISVRWNLNSIQFFCYRENRGFADMKLSLVGEALITVPQGWKDTVPSAVGWELNKGRKASRCISLAQSMDPTRLAISAADLNLKLMRWRALPSLDLNALSSMKCLLLGAGTLGCQAWGVRKITLVDNGRVAMSNPLRQSLYTLDNCLNGGEFKATAAVESLKRIFPAVEAEGIVMAIPMPGHPIQSQEHDSVLDDCKRLRDLIEAHDSVFLLTDTRESRWLPTLLCANTNKITITAALGFDSFLVMRHGAGPLSQAHKLNAEIINSSSVDMPVNDANGNHRLGCYFCSDVVAPTDSTSNRTLDQQCTVTRPGLAPIASALAVELLIGILHHPQGIFAVGDINNNVDRATEQPLGILPHQIRGSLSQFSQMTLIGYSSASCTACSQTLFDNASSAISSDLDVLPITPGHETVVSEYQNQGMEFIFQAINHPTYLEDLTGLTELMKSATSLDWDREIDEEDEDCVEI 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02768 762 CDD Apg7 400 736 - -
Vimu5g02768 762 NCBIfam E1-like protein-activating enzyme Gsa7p/Apg7p 47 686 IPR006285 GO:0005737
Vimu5g02768 762 Pfam Ubiquitin-like modifier-activating enzyme ATG7 N-terminus 45 366 IPR032197 -
Vimu5g02768 762 FunFam Ubiquitin-like modifier-activating enzyme ATG7 200 334 - -
Vimu5g02768 762 Gene3D - 50 362 IPR042522 -
Vimu5g02768 762 MobiDBLite consensus disorder prediction 14 30 - -
Vimu5g02768 762 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 358 686 IPR045886 -
Vimu5g02768 762 Gene3D - 366 760 - -
Vimu5g02768 762 FunFam Ubiquitin-like modifier-activating enzyme atg7 50 218 - -
Vimu5g02768 762 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 392 683 IPR035985 GO:0008641
Vimu5g02768 762 Gene3D - 45 334 IPR042523 -
Vimu5g02768 762 Pfam ThiF family 380 629 IPR000594 -
Vimu5g02768 762 FunFam Ubiquitin-like modifier-activating enzyme ATG7 367 693 - -
Vimu5g02768 762 MobiDBLite consensus disorder prediction 1 35 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02768 K08337 - gmx:100781725 1204.12