Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02767 ATGGCTGTGGCTTCCTTCTCCAACTTCTCCGCCGGGCGCTCTTTCTCTCTACAAAACCGTTATTCACTGCCGCTACCATCCTTCACTCTCTCATTCCGTCCCACAAACTCTCATGCCTACGCTCCCCTGTTCACATCTCTTCGAACTCCCGCACCCTCCATTGTTGCAGCGGCCCACGGCGGAGGGACCGGAGGAGGGCATGGAGGAGGTGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAGGCGACGGGGAATCGGAAGACAGGGATCGAAACAGAGAGGAGGCGCTCCTGGTTCTCGCGGAGGCAGGGCGGCCGCTGGAGAAATTGCCGGCGGATTTAGCGGCGGCGGTTGAGGCGGGGCGAGTTCCGGGGTCGATTTTGAAGAGGTTCTTCGAGCTGGAAAAATCGGCGGTGTTCCGGTGGTTGCTGAATTTCGGAGGGTTTAAGGAGAGGTTGCTAGCGGATGATTTGTTCCTTGCCAAGGTTGGCATGGAATGCGGTGTTGGCATCTTTACGAAGACTGCTGCGGAGTTGGAGAAGCGCAAAGAAAATTTTAGTAAGGAGCTTGATTTTGTTTGTGCCGATGTGATAATGGCCATTGTAGCGGATTTTATGCTTGTGTGGCTTCCTGCTCCCACAGTTTCTCTCCGACCACCACTTGCCGTTAGTGCTGGAACTCTTGCTAAAGTTTTCTATGGCTGCCCTGAAAACGCTTTTCAGGTGGCTTTGGCCGGAACCTCATATACACTCATCCAGAGAATAGGTGCTATAGTGCGTAACGGTGCAAAGCTATTTGCTGTTGGGACTGGTGCATCACTGATTGGTACAGGTATAACAAATACACTGATCAATGCAAGGAAATTGGTTGACAAATCTTTTGCTGCTGAGGCGGAGGATTTGCCGGTAATATCGACAAGTGTTACCTATGGGGTTTACATGTCAGTATCTAGCAACTTAAGGTACCAATTACTAGCTGGAGTTATTGAACAACGGATTCTAGAACCTTTGTTGCACCAGCACAAGCTTGCGCTGAGCGCAATTTGCTTTGTTGTTAGAACTGGAAACACTTTCTTGGGCTCATTATTGTGGGTGGATTATGCTCGCTGGGTTGGAGTCCAGAGGAGTCGGGATTAG 1134 0.5141 MAVASFSNFSAGRSFSLQNRYSLPLPSFTLSFRPTNSHAYAPLFTSLRTPAPSIVAAAHGGGTGGGHGGGGGGGGGGGGGGDGESEDRDRNREEALLVLAEAGRPLEKLPADLAAAVEAGRVPGSILKRFFELEKSAVFRWLLNFGGFKERLLADDLFLAKVGMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLRPPLAVSAGTLAKVFYGCPENAFQVALAGTSYTLIQRIGAIVRNGAKLFAVGTGASLIGTGITNTLINARKLVDKSFAAEAEDLPVISTSVTYGVYMSVSSNLRYQLLAGVIEQRILEPLLHQHKLALSAICFVVRTGNTFLGSLLWVDYARWVGVQRSRD 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02767 377 Coils Coil 175 195 - -
Vimu5g02767 377 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 32 375 - -
Vimu5g02767 377 MobiDBLite consensus disorder prediction 55 90 - -
Vimu5g02767 377 Pfam Protein RETICULATA-related 150 327 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02767 Vimu-Chr5 37238730 37245669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02767 - - gmx:100818590 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02767 5 37238730 37245669 Vimu5g02767 5 37238730 37245669 ECH