Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02741 ATGGTTTTCACGGAGTCGTCTCTTCTCCTTCCGTCTGGTTCGAACAGCAGGAAGAGCAATGTTCCGGAAGACAAATGGGATTTGGCGTACATAGTGTATTTCTTCCTGGGATTCGGTTACCTTCTCCCGTGGAACGCTTTCATCACAGCCGTTGATTACTTCTCCTATCTTTACCCTGACACAAGCGTTGACCGCATCTTCGCCGTCGTTTACATGATCATCGGCCTCGTCGGAATCTCCCTCATCATCCTGTACAGTCACAGCTCCAAAGCCTTTTTCAGAATCAACCTTGGTTTGGTCCTCTTCGTCGTTTCTCTCCTCATCGTTCCCCTAGTTGATGCCTTCTACGTCAGGGGTCGTGTCGGAGTCATCGGTGGATTCTACGCCGCCGCCTTCGCCGCCGGCCTCTCCGGTGTCGCCGATGCCCTCGTGCAGGGTTCCATTGTTGGCTCCGCAGGCGAGCTGCCGGAGAGGTACATGCAAGCTGTCATAGCTGGCACAGGCGGTTCTGGGGTGCTTGCTTCTGTCCTGAGGATAATCACAAAAGCTGTTTACCCACAAGATGCCTCTGGCCTACAAAAGAGTGCAAATCTATACTTCTCTGTATCAATTGTGATTGTGTTCATATGCATGGTTTTATACAACATGGTGCACAAACTTCCTGTTATGAAGTATTATAATGAACTTAAGGCTGAGGCGGCTGCTGCAAATGCAGACAGTGATCCCCCAACTGGAGTTGTCTGGAGGTCGACTTTATGGGATATTGTGGGAAGCATCAAGTGGTATGGATTTGCCATTGTGCTCATTTATGCTGTGACTCTGGCAATTTTTCCTGGTTACATTACCGAGGACGTGCACTCTGAAGTTCTTAAGGATTGGTATCCAATTCTCCTAATTGCTGCCTATAATGTGTTTGATCTGGTTGGCAAGTCTCTGACTGCAGTTTATCTCCTACAGAATGCAAAAGTTGCAATAGGTAGTTGCATAGCAAGATTGCTGTTTTTCCCTCTCTTCTTAGGGTGCTTGCATGGTCCCCAATTCTTCCGGACTGAGATTCCCGTGACGATACTAACTTGCCTCTTAGGGCTTACTAATGGCTACCTAACCAGTGTATTGATGATTATGATTCCTAAAGCTGTAAAGTCGCAGCATGCAGAGACTGCAGGGATTGTGAGTGTATTATTCTTAGTTTTTGGTTTGGCTTCTGGGTCTGTTATAGCTTGGTTTTGGGTCATCTGA 1239 0.4754 MVFTESSLLLPSGSNSRKSNVPEDKWDLAYIVYFFLGFGYLLPWNAFITAVDYFSYLYPDTSVDRIFAVVYMIIGLVGISLIILYSHSSKAFFRINLGLVLFVVSLLIVPLVDAFYVRGRVGVIGGFYAAAFAAGLSGVADALVQGSIVGSAGELPERYMQAVIAGTGGSGVLASVLRIITKAVYPQDASGLQKSANLYFSVSIVIVFICMVLYNMVHKLPVMKYYNELKAEAAAANADSDPPTGVVWRSTLWDIVGSIKWYGFAIVLIYAVTLAIFPGYITEDVHSEVLKDWYPILLIAAYNVFDLVGKSLTAVYLLQNAKVAIGSCIARLLFFPLFLGCLHGPQFFRTEIPVTILTCLLGLTNGYLTSVLMIMIPKAVKSQHAETAGIVSVLFLVFGLASGSVIAWFWVI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02741 412 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 18 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vimu5g02741 412 PIRSF ENT 5 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vimu5g02741 412 Pfam Nucleoside transporter 136 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vimu5g02741 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 388 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vimu5g02741 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 132 152 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vimu5g02741 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 298 319 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02741 Vimu-Chr5 37091238 37093241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02741 5 412 Organic Solute Cotransporters AT1G70330 66.423 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02741 K15014 - gmx:100793043 676.781