Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02719 ATGCATAACTTGCAAATTTGTGTTTCTTCAATGGAGTTTTGTAATCGAATTATCCTCAAACATGTTTCCATTTTACTGGTTTTTTTCCTTAGTTGTTCGACCTCTAAAACTGTCACTCCCTCGCTTCTGGACTTGGTGGTTACCAACACCACAGTCCTACACCGCAATTTCACTGCACTATCAGAATTCAGACTGATAAACAGACGAATTTTGAACGATTGCTCTGCTTCGAATCCCTTCATCGAAGTGAATGTCGACTCAAATTCCACTCTATCGGATGACGAGTTTGTGAGAGTTACAGTCACAGGGGTTTCCAATCCTTCAGATGGTGATTGGGTTGCCATGATCTCACCTTCAAATTCTGATGTGAAATCCTGTTTGCTGAATGAGTTGTTCTATCTGCAAACTGGTGATACGGCCAAACTTCCTCTGTTATGCCACTACCCTGTCAAGGCACAGTACATGAAAAATGATCCAAACTACCTCAGTTGCAAAAACAAAGAATGCAAGAAATACCAAGATGGGAAATGTGTTATCTCAACGTGCAGTGGTTCAATACAATTTCATGTCATCAATATTAGAAGTGACATTGAGTTCGTGTTCTTCTCTGGTGGATTCCTGAAACCTTGCCTTGTAGGAAGGTCCACGCCCTTGAGTTTTGCTAATCCCAAGACGCCACTCTATGGCCATCTATCAAGTATAGATTCAACTGGAGCATCAATGAGATTGACATGGGTTAGTGGAGACAAGGAGCCTCAGCAAATCCAATATGCAAATGGAAAAGCAGTTACTTCAACAGTCACTACATTCTCACAAGCTGATATGTGTAGTTCAGCGCTGCCCAGTCCTGCTAAGGATTTCGGATGGCATGATCCGGGATACATCCATTCAGCACTTATGACAGGACTAAAGCCTTCAAGCCCATTTTCCTACAAATATGGAAGTGACTCGGTTGGTTGGAGTAAAGAAATTCAGTTTTCAACTCCACCAGCTGGAGGATCGGATGAGGTCAGATTCATTGCATTTGGTGATATGGGCAAAACTCCTCTCGATGCTTCCAAAGAACACTACATTCAGCCTGGAGCTCTTTCAGTGATTAAAGCTATAGCCAAAGATGTAAATTCCAAAAATGTAAATTCTGTGTTTCATATCGGAGACATAAGCTATGCGACAGGTTTTCTAGCAGAATGGGATTTCTTCCTTCACCTTATCAACCCAGTAGCTTCCAGGCTTTCTTATATGACAGCAATAGGGAATCATGAGAGGGATTACGTAGATTCTGGTTCAGTATATATTACTCCTGACTCTGGAGGGGAATGTGGAGTACCGTATGAAACATATTTCCCAATGCCAACTTCAGCAAAAGATAAGCCTTGGTACTCTATAGAACAAGGAAGTGTTCATTTCACAGTAATATCAACTGAGCATGATTGGTCAGAAAATTCTGAGCAGTATGCGTGGATGCAAAAGGACATGGCATCGGTTAATCGACAGAAAACTCCTTGGCTAATCTTCATGGGACATAGACCGATGTACACTTCTCACCAGGGATTGTTATCCTCTGAAAACAAATTTAATGAAGCTGTGGAGCCATTGCTATTTCAAAACAAGGTTGACTTGGCTCTTTTCGGCCATGTACATAATTATGAGAGAACTTGTTCCGTGTTTCAACATAAATGTAAAGCCATGCCTACAAAAGATAAAAATGGAATGGATACATATGATGGCCGAAATTACAGTGCTCCAGTGCAAGTTGTCATTGGCATGGCTGGCTTCACCTTGGACAACTTTTCAAGCAATGTTGAGAGCTGGAGCCTGAAAAGGATTTCCGAATTTGGTTATCTAAGAGCATATGCTACAAGGAAGGACTTAAGCCTAGAGGTTAGTGCTTACTCTCTTGTATTCTACTCTCACTCGCTTCCATAG 1926 0.4154 MHNLQICVSSMEFCNRIILKHVSILLVFFLSCSTSKTVTPSLLDLVVTNTTVLHRNFTALSEFRLINRRILNDCSASNPFIEVNVDSNSTLSDDEFVRVTVTGVSNPSDGDWVAMISPSNSDVKSCLLNELFYLQTGDTAKLPLLCHYPVKAQYMKNDPNYLSCKNKECKKYQDGKCVISTCSGSIQFHVINIRSDIEFVFFSGGFLKPCLVGRSTPLSFANPKTPLYGHLSSIDSTGASMRLTWVSGDKEPQQIQYANGKAVTSTVTTFSQADMCSSALPSPAKDFGWHDPGYIHSALMTGLKPSSPFSYKYGSDSVGWSKEIQFSTPPAGGSDEVRFIAFGDMGKTPLDASKEHYIQPGALSVIKAIAKDVNSKNVNSVFHIGDISYATGFLAEWDFFLHLINPVASRLSYMTAIGNHERDYVDSGSVYITPDSGGECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYAWMQKDMASVNRQKTPWLIFMGHRPMYTSHQGLLSSENKFNEAVEPLLFQNKVDLALFGHVHNYERTCSVFQHKCKAMPTKDKNGMDTYDGRNYSAPVQVVIGMAGFTLDNFSSNVESWSLKRISEFGYLRAYATRKDLSLEVSAYSLVFYSHSLP 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02719 641 SUPERFAMILY Purple acid phosphatase, N-terminal domain 215 330 IPR008963 GO:0003993|GO:0046872
Vimu5g02719 641 Pfam Purple acid Phosphatase, N-terminal domain 230 328 IPR015914 GO:0003993|GO:0046872
Vimu5g02719 641 SUPERFAMILY Metallo-dependent phosphatases 337 626 IPR029052 -
Vimu5g02719 641 PANTHER PURPLE ACID PHOSPHATASE-RELATED 54 628 - -
Vimu5g02719 641 Pfam Calcineurin-like phosphoesterase 338 549 IPR004843 GO:0016787
Vimu5g02719 641 CDD MPP_PAPs 336 614 IPR041792 -
Vimu5g02719 641 Gene3D - 333 634 IPR029052 -
Vimu5g02719 641 Gene3D - 225 332 - -
Vimu5g02719 641 Pfam Iron/zinc purple acid phosphatase-like protein C 581 627 IPR025733 -
Vimu5g02719 641 Pfam Fn3-like domain from Purple Acid Phosphatase 90 222 IPR040974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02719 Vimu-Chr5 36939812 36947906 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02719 95 626 Miscellaneous Gene Families AT2G03450 31.081 2.60e-67 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02719 K22390 - gmx:100802505 1118.22