Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02717 ATGTCTTCTCATTCTCTTTCTTCCATGGAATCTTGTAAAGTTCTCAAATATGTATCAGTTTTGCTGATTTTTCTCCTTAGCCTTCATTTTTCAACCTCTGAAACTCTCAGTCCCTCACTTTTGCACCGTGTGATTACTGACACCAAAGTCCTACACAGCAATTTCACTGCAATATCAGAATTCAGAACGATAAACAGAAAAATTCTGGCTGATTGTTCTGCTTCAAATCCCTTTATCCGTGTGAATGTGACCTCAAATTCAAGCCTATCAGATGATGGATTCGTGACAGTAACAGTCACCGGAGTTTCAAAACCTTCAGACAATGATTGGGTTGCCATGATCTCACCTTCCAATTCTGATGTTTCATCTTGTGTTCTAACAGAGTTTTTCTATCTGCAAACTGGTGATACAGCCAAACTTCCTTTGCTTTGCCATTATCCTATCAAGGCACAGTACATGAGCAAAGATCCAAATTACCTCAGTTGCAAAAACAAAGAATGCAAGAAATATCAAAATGGGACATGCGTTACCTCAACGTGCAGTGGTTCGATACAGTTTCATGTTGTGAATATCAGAAGTGACATTGAGTTTGTGTTCTTCTCTGGTGGATTCCTGAAACCCTGCCTTGTGGGAAGGTCCAAGCCTCTCAGTTTTTCTAATCCCAAGAGTCCTCTCTATGGACATCTCTCAAGCATAGATTCATCTGGAACATCTATGAGACTAACATGGGTTAGTGGAGACATGAAGCCTCAACAAATCCAATATGCAAATGGAAAAACAGTTACTTCAACAGTTACTACATTTTCGAAAGCTGATATGTGCAGTTCTGTAGTGCCTAGTCCTGCTAAAGATTTCGGATGGCATGATCCAGGGTACATTCATTCAGCAGTAATGACTGGCCTTGCCCCTTCAAGCAAATTCCCATACAGATATGGAAGTAACGCTGTTGGTTGGAGTAAACAAATCATGTTGAAAACTCCACCAGTTGGAGGATCAAATGAGCTCAGATTCATTGCATTTGGTGATATGGGAAAGACTCCTCTTGATGCCTCGGAAGAACACTACATTCAGCCAGGAGCACTTTCTGTGATTAAAGCCATAGCCAAGGATGTAGATTCCAAGAATATAGATTCAATCTTTCACATTGGAGATATAAGCTATGCAACAGGTTTTCTTGCAGAATGGGAATTCTTCTTTCACCTCATCAACCCAATAGCTTCCAGAATTTCTTATATGACAGCAATAGGGAACCATGAGAGGGATTATATAAATTCAGGTTCAAAGTATATCACTCCTGACTCTGGTGGGGAATGTGGTGTAGCTTATGAAACATACTTTCCAATGCCAACTTCAGCAAAGGATAAGCCTTGGTACTCTATTGAGCAGGGAAGTGTTCATTTCACATATGAGTGGATGCGAAAGGACATGGCATCAGTTAATCGACAGAAAACTCCTTGGCTAATCTTCACAGGACATAGACCGATGTACACCTCTAGCCACTCATTTTTGTATTCTGGTAGCAAGTTTATTGACACTGTGGAGCCATTGCTGTTTCAAAATAAGGTTGACTTGGCTCTCTTCGGCCACATACATAATTACGAGAGAACTTGTTCTGTATTTCAAAATGAATGTAAAGCTTTGCCTACAAAAGATAAAAATGGAGTAGACAAATATGATGGCAGAAATTACAGTGCCCCTGTGCAAGTTGTTATTGGCATGGCTGGCTTTACTTTAGACAAATTTTCAACTAATTTTGTCGTCTCAAATACATCACAAGTTAAGGATAGTTTCCGAATTACAAAGTGA 1806 0.3981 MSSHSLSSMESCKVLKYVSVLLIFLLSLHFSTSETLSPSLLHRVITDTKVLHSNFTAISEFRTINRKILADCSASNPFIRVNVTSNSSLSDDGFVTVTVTGVSKPSDNDWVAMISPSNSDVSSCVLTEFFYLQTGDTAKLPLLCHYPIKAQYMSKDPNYLSCKNKECKKYQNGTCVTSTCSGSIQFHVVNIRSDIEFVFFSGGFLKPCLVGRSKPLSFSNPKSPLYGHLSSIDSSGTSMRLTWVSGDMKPQQIQYANGKTVTSTVTTFSKADMCSSVVPSPAKDFGWHDPGYIHSAVMTGLAPSSKFPYRYGSNAVGWSKQIMLKTPPVGGSNELRFIAFGDMGKTPLDASEEHYIQPGALSVIKAIAKDVDSKNIDSIFHIGDISYATGFLAEWEFFFHLINPIASRISYMTAIGNHERDYINSGSKYITPDSGGECGVAYETYFPMPTSAKDKPWYSIEQGSVHFTYEWMRKDMASVNRQKTPWLIFTGHRPMYTSSHSFLYSGSKFIDTVEPLLFQNKVDLALFGHIHNYERTCSVFQNECKALPTKDKNGVDKYDGRNYSAPVQVVIGMAGFTLDKFSTNFVVSNTSQVKDSFRITK 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02717 601 Gene3D - 223 329 - -
Vimu5g02717 601 SUPERFAMILY Metallo-dependent phosphatases 334 539 IPR029052 -
Vimu5g02717 601 Pfam Purple acid Phosphatase, N-terminal domain 228 326 IPR015914 GO:0003993|GO:0046872
Vimu5g02717 601 PANTHER PURPLE ACID PHOSPHATASE-RELATED 52 592 - -
Vimu5g02717 601 Pfam Calcineurin-like phosphoesterase 335 533 IPR004843 GO:0016787
Vimu5g02717 601 Pfam Fn3-like domain from Purple Acid Phosphatase 88 220 IPR040974 -
Vimu5g02717 601 Gene3D - 330 599 IPR029052 -
Vimu5g02717 601 CDD MPP_PAPs 333 581 IPR041792 -
Vimu5g02717 601 SUPERFAMILY Purple acid phosphatase, N-terminal domain 215 328 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02717 Vimu-Chr5 36930917 36936692 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02717 95 575 Miscellaneous Gene Families AT2G03450 31.066 8.19e-60 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02717 K22390 - gmx:100775839 974.541