Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02713 ATGATATGCATGCAGCTTATTGTTGTTTTAATAAGAATTTTCTTTAGCAAATGTATGATGAGGTTTAAATTTAAGGTTGACCTCCTTCCAAGAGATACTGATCTTAATTGTGTAGGGGATTGGGTTGTAGAGGCTACCATGAGAAAGAAGCTGAATGTTCTCAGTGTTCATCTCACCAGTTCCAAATCATTGGTTGGAGTAACTGGAGTGATATCAGAAATCCAGAAAGAGAAAAAGGGAAGAGACGTTTACATTCTGGGTTCAGCAAATGTTGGAAAATCCGCCTTCATCAATGCTTTATTAAAAACAATGGCTATAAATGATCCCGTGGCTGCATCTGCACAAAGATACAAACCAATACAATCTGCAGTTCCTGGAACTACCCTAGGGCCAATTCAAATTAATGCTTTTCTAGGAGGAGGGAAATTGTATGACACTCCCGGAGTTCATCTCCACCATAGGCAAACTGCAGTTGTTCAATCTAAAGATCTACCTTCCCTTGCTCCTCGGAGCCGATTGAGGGGCATTTCTTTCCCGAGGTCTTCGGTATCTGCGGACAATGTAGAGCAAGTAGCTTCCATAGAGAATGGCTTGAATGCATTTTCAGTTTTCTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGGCCCAAGGGACTACATATACATATGGTACCCACAGAGAAAGCATATGAGTTTTATCAGAAAGAACTTGGTGTCCTCCTGACTCCACCAAGTGGAGGAGAAAATGTTGAAAGCTGGAAAGGACTTGAATCAGAACGTAAATTGCAAATAAAATTCGAAGATGTGGAAAGACCAGCTTGTGATATAGCTATATCAGGTCTAGGGTGGTTTACCGTCGAGCCAGTTGGTAGGTCACGCAAAATCTCTCAATCAAAACCTGTCGAGACTACTGAGGAATTGATTTTGGTCGTGCGAGTCCCCAAACCTGTTGAGATTTTTGTGAGGCCACCGATACCAGTAGGCAAGGCTGGAGCAGAGTGGTACCAGTATGTAGAATTAACAGAGAAAGAAGAGGAAATGAGACCGAAATGGTACTTTTGA 1095 0.4183 MICMQLIVVLIRIFFSKCMMRFKFKVDLLPRDTDLNCVGDWVVEATMRKKLNVLSVHLTSSKSLVGVTGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQTAVVQSKDLPSLAPRSRLRGISFPRSSVSADNVEQVASIENGLNAFSVFWGGLVRIDVLKVLPETCLTFYGPKGLHIHMVPTEKAYEFYQKELGVLLTPPSGGENVESWKGLESERKLQIKFEDVERPACDIAISGLGWFTVEPVGRSRKISQSKPVETTEELILVVRVPKPVEIFVRPPIPVGKAGAEWYQYVELTEKEEEMRPKWYF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02713 364 Pfam 50S ribosome-binding GTPase 83 154 IPR006073 GO:0005525
Vimu5g02713 364 Gene3D - 11 153 IPR027417 -
Vimu5g02713 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 153 IPR027417 -
Vimu5g02713 364 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 25 364 IPR044229 GO:0003924
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02713 Vimu-Chr5 36910155 36916928 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02713 K13427 - gmx:100798614 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02713 5 36910155 36916928 Vimu5g02713 5 36910155 36916928 ECH