Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02708 ATGATGCTAGATTTGGGTCCGTTCTCGAACGAGAACTTCGACCCCAAGAAATGGATCAACTCGGCCTGTCAGAGTCGACACCCTCAGGACTCTTTGGACAAACACCTTGTGGACATGGAGATGAAGCTGCAGATGGTGTCAGAGGAAATCGCGGCGTCGCTCGAGGAGCAGAGCTCTGCCGCTCTCCTCCGTGTCCCCCGCGCCACTCGGGACGTCATCCGCCTCCGCGACGACGCCGTCTCTCTCCGGTCGGCTGTCTCCTCCATCCTCCAGAAGCTCAAGAAGGCAGAGGGATCGTCTGCTGAATCTATAGCTGCACTTGCTAAAGTCGACGTTGTCAAACAGAGAATGGAAGCTGCATATGACACGTTGCAGGATGCTGCGGGATTAACTCAATTGAGTTCGACTGTGGAGGATGTATTTGCCAGTGGAGATCTACCTCGTGCTGCAGAAACTCTAGCTAACATGAGGCATTGCTTGTCAGCAGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTATTGGAGGATAGGCTAGACACGATGGTGCAGCCTCGTATCACAGACGCGTTATCTAATCGCAAGGCCGATGCTGCTCAAGATTTACGGTCTATTCTCATCAGAATTGGAAGGTTTAAGTCTCTGGAATCACAATATATAAAGGTTCATCTGAAACCAATTAAGCAGCTTTGGGAAGATTTTGATTCTAGAGAACGAGGCAATAAGTCTGCTATTGAGAAAAATGAGATGGAGAGGATATCAAGTAGTGGTGATTTTCATTCAGTTTCACCTGCAATACCATTCTCCACCTGGCTACCAAGCTTTTATGACGAGCTACTGCTTTACCTTGAACAAGAGTGGAAATGGTGCATGGTTGCTTTTCCTGAAGATTATAAAACTCTTGTACCGAGGCTACTAAGTGAGACTATGATGACTATAGGAACCAGCTTCCAATCTCGTATCAACATTGCCATTGGAGATGCTGTTCCAGAGACAAAAGCACTGGCTAAAGGTTTACTAGATACTTTAGCGGGAGATATGCATAAAGGCATTAAGATTCAAACGAAGCATCTCGAGGCCTTGATTGAATTGCACAACATGACTGGGACCTTTGCGAGGAATATTCAACACTTGTTTTCTGTTTCTGATATCCGAGTTTTAAGGGATGTGCTGAAAGCTGTGTACTTGCCTTACGAATTGTTTAAACAGAGGTATGGACAAATGGAGCGTGCCATCCTTTCCTCTGAGATTGCGGGAGTAGACTTAAGAGGAGCTGTCATTCGAGGGGTGGGAGCCCAAGGAATTGAACTCAGTGAAACAGTTCGTAGAATGGAGGAATCTATTCCTCAAATAATTATACTTCTTGAAGCAGCCGCAGAGAGATGCATCAACTTCACTGGAGGTTCTGAGGCAGATGAACTGATTCTTGCCCTTGATGACATAATGTTACAATACATTTCCTCTCTGCAAGAAACACTTAAGTCACTGAGAACTGTCTGTGGTGTGGATTATGGAAGTGATGGTACTTTTAAGAAGGACACAGAGAAGAAGGATGGAAACCAAAATTCTCGGAGAGTTGATTTGATCTCAAATGAGGAGGAATGGTCCATAGTCCAAGGGGCATTGCAAATCCTGACAGTTGCAGATAGTTTGACAAGCAGATCTTCTGTATTTGAAGCATCTTTAAGAGCCACTCTTGCTAGATTGAGCACAACCCTATCTTTTTCTGCATTTGGTTCAGCTTTAGACCAAAACCAGACTATTAATAGTAGTGTAGAAGGGGAACCATCTTATGGCGGAAGGGCTGCCTTGGATATGGCAACACTGCGGTTGGTTGATGTGCCTGAGAAGGCCAGGAGACTCTTTAACCTTTTGAATCAGTCTAAAGATCCCCGATTTCACGCACTTCCCCTTGCATCTCAAAGAGTTGCAGCATTTGCAGACACGGTTAACGAACTTGTATATGATGTCCTCATATCCAAAGTGCGTCAACGCCTCAGTGATGTGTCCCGTATGCCAATTTGGTCATCAGTTGAGGAACAAGGAAACTTTCCTCTCCCTACCTTCAGTGCATATCCACAGTCCTATGTTACTAGTGTTGGTGAATATCTTCTTACTTTACCCCAACAACTGGAGCCACTTGCTGAGGGAATTAACAATGAAGTCAATGATGAAGCGCAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCTACTGCACTTTACATCGAGCAGTTGCGTGGGATTCAATACATTTCAGATCGTGGAGCACAGCAGCTATCAGTTGATATTGAGTATCTTAGTAATGTGCTTTCTGCTCTATCAATGCCAATTCCTCCAGTTCTGGCTACATTCCAAAGTTGTCTTTCTTCTCCAAGAAACCAACTACAAGATCTTTTAAAGACAGATTCAGGAAACCATCTTGATATGCCAACAGCAAACCTTGTTTGTAAGATGCGACGAGTGAATTTGGACTCATGA 2502 0.4484 MMLDLGPFSNENFDPKKWINSACQSRHPQDSLDKHLVDMEMKLQMVSEEIAASLEEQSSAALLRVPRATRDVIRLRDDAVSLRSAVSSILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYDTLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRITDALSNRKADAAQDLRSILIRIGRFKSLESQYIKVHLKPIKQLWEDFDSRERGNKSAIEKNEMERISSSGDFHSVSPAIPFSTWLPSFYDELLLYLEQEWKWCMVAFPEDYKTLVPRLLSETMMTIGTSFQSRINIAIGDAVPETKALAKGLLDTLAGDMHKGIKIQTKHLEALIELHNMTGTFARNIQHLFSVSDIRVLRDVLKAVYLPYELFKQRYGQMERAILSSEIAGVDLRGAVIRGVGAQGIELSETVRRMEESIPQIIILLEAAAERCINFTGGSEADELILALDDIMLQYISSLQETLKSLRTVCGVDYGSDGTFKKDTEKKDGNQNSRRVDLISNEEEWSIVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSALDQNQTINSSVEGEPSYGGRAALDMATLRLVDVPEKARRLFNLLNQSKDPRFHALPLASQRVAAFADTVNELVYDVLISKVRQRLSDVSRMPIWSSVEEQGNFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGINNEVNDEAQFFATEWMFKVAEGATALYIEQLRGIQYISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQSCLSSPRNQLQDLLKTDSGNHLDMPTANLVCKMRRVNLDS 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02708 833 Pfam Golgi complex component 7 (COG7) 4 828 IPR019335 GO:0006886|GO:0017119
Vimu5g02708 833 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 3 829 IPR019335 GO:0006886|GO:0017119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02708 K20294 - gmx:100794449 1494.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02708 5 36887403 36892534 Vimu5g02708 5 36887403 36892534 ECH