Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02707 ATGATGGATCAGTTCATGGACAATCCGTTCCTCTCTGCGCCTCGCGGTATCGGAGCTGGAGCCGGAGCTCGTCGCGGATGGAACGCGAGAGAGACAGAAGATGCTCTGCTTCTACGCGTGGACATGCCTGGGCTTGGCAAAGAAGACGTGAAGATCTCCGTGGAGCAGAACACTCTAACTATCAAAGGTGAAGGTGCCAAAGAAGGCGACGAGGAAGAGAGCGCTCGTCGCTATACCAGCAGGATTGACTTGCCGGATAAGGTTTACAAGGTAGATCAGATCAAAGCTGAGATGAAGAATGGTGTGCTGAAGGTTGTTTTGCCTAAAATGAAGGAGGAGGAGAGGAGAGATGTGATCAATGTCAGTGTTGAATAA 375 0.5067 MMDQFMDNPFLSAPRGIGAGAGARRGWNARETEDALLLRVDMPGLGKEDVKISVEQNTLTIKGEGAKEGDEEESARRYTSRIDLPDKVYKVDQIKAEMKNGVLKVVLPKMKEEERRDVINVSVE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02707 124 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 124 IPR002068 -
Vimu5g02707 124 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 119 IPR044656 -
Vimu5g02707 124 CDD ACD_sHsps-like 30 109 - -
Vimu5g02707 124 Gene3D - 1 123 IPR008978 -
Vimu5g02707 124 Pfam Hsp20/alpha crystallin family 30 123 IPR002068 -
Vimu5g02707 124 SUPERFAMILY HSP20-like chaperones 3 116 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02707 Vimu-Chr5 36882957 36883331 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02707 K13993 - gmx:547852 202.986