Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02706 ATGGGTTTGGCACCAGAAGTGTTGGCTCGGAGAAGTGGTGGCAAGCTCGTTGGAGCTCGGGTTCTGCAGTACATAAATGGAGGCCCTCTTTCCTTCAAAACCTACCAGCTCATCGTTCTGATTGTAACATTTTTGGCTTATACTAGCTATCATGCTACAAGAAAAACCACTAGTATTGTAAAGAGTGTTCTTGATCCACAATCAGCAGACACAGGCCTGACCTTCTTTCGGTTAAGGCCAATCAATGTCACTGAGTCAAATGGATTAAGGAGAGTTTCTTCCAAACTTGGAGAAGGTTGGGCACCGTTTAATGGATCAGATGGAACATCCCTTCTGGGTCAATTGGATGTTGCTTTTCTTGCTGTGTATGCTTTTGGGATGTATTTTTCTGGGCATTTTGGCGATCGGTGTAATTTGAGGATTTTTCTAACAGTTGGGATGGTAGGAACTGGGTTGTTTACTTCACTATTTGGGGTAGGGTACTGGGGAAACATTCACAACTTTTACTATTTCTTAGTGGTTCAAATGATTGCTGGATTGTTTCAATCCACTGGATGGCCGTCTGTGGTTGCCGTGGTGGGTAACTGGTTTGGAAAGAGCAAGAGAGGGTTGATCATGGGAATTTGGAATGCTCACACTTCAGTTGGGAACATCGTTGGTTCTTTGATTGGTTCTGCTATGTTGACCTATGGATGGGGTTGGTCCTTTGTTGTGCCAGGACTAATAACTGCTTTCATTGGTCTGGTGGTTTTCCTTATATTGCCCGTTACACCTGAGTCTGTTGGAGCTGATAGAGAAGAAGATGATATCAGTTTTCCAGTAAAAGGTGGAGAAGAAGCTGCAGAGCCTTTGCTAAGGCAAGAGACTCCAGTTGAGGAGAAAGAAGCAGTTGGGTTCTTAGAGGCATGGAAAATTCCTGGGGTTGCTCCCTTTGCTCTCTGTCTGTTTTTTGCCAAATTGGTTGCATATACGTTTCTCTATTGGCTCCCATTCTATGTTAGCCACACAGCAATTGATGGGAAATATCTATCCAGTGGAACATCAGGAACTCTATCAACTTTATTTGATGTTGGAGGAGTGCTGGGGGGAATTCTGGCTGGTCACATTTCTGATCGCTTAGATGCTAGAGCCATTACTGCAGCAAGTTTCATGTACTGTGCAATCCCTGCTCTCTTCTTCTATAGAAGCTACGGGCACATTTCGTTGCTTTTGAATGGAGCATTGATGTTCGTCACTGGCATGTTTGTGAACGGGCCTTATGCTCTCATAACCACTGCGGTTTCGGCTGACCTGGGAACACATAAGTCATTGAAGGGTAATTCACGAGCTCTTGCAACTGTGACAGCAATCATTGATGGAACCGGTTCTATAGGAGCTGCAGTTGGACCCCTGTTAACAGGTTATATTTCTGCAAAGAGTTGGAGTGCTGTTTTCACAATGTTGATGGGAGCAGCCTTAGTTGCAGGATTGCTTTTGACCAAGCTAGTAGTGGCAGAGGTAACCACAAAGATAGAAGAATCAAGGCCTAATAGAGCACCGGAATCTTCACTCATTGTATAA 1560 0.4436 MGLAPEVLARRSGGKLVGARVLQYINGGPLSFKTYQLIVLIVTFLAYTSYHATRKTTSIVKSVLDPQSADTGLTFFRLRPINVTESNGLRRVSSKLGEGWAPFNGSDGTSLLGQLDVAFLAVYAFGMYFSGHFGDRCNLRIFLTVGMVGTGLFTSLFGVGYWGNIHNFYYFLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNIVGSLIGSAMLTYGWGWSFVVPGLITAFIGLVVFLILPVTPESVGADREEDDISFPVKGGEEAAEPLLRQETPVEEKEAVGFLEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSGTSGTLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHISLLLNGALMFVTGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAVGPLLTGYISAKSWSAVFTMLMGAALVAGLLLTKLVVAEVTTKIEESRPNRAPESSLIV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02706 519 PIRSF Hexose_phosphate_transp 29 512 IPR000849 GO:0016020|GO:0022857|GO:0055085
Vimu5g02706 519 Pfam Major Facilitator Superfamily 111 431 IPR011701 GO:0022857|GO:0055085
Vimu5g02706 519 Gene3D MFS general substrate transporter like domains 30 268 IPR036259 -
Vimu5g02706 519 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 17 513 - -
Vimu5g02706 519 Gene3D MFS general substrate transporter like domains 303 509 IPR036259 -
Vimu5g02706 519 SUPERFAMILY MFS general substrate transporter 35 496 IPR036259 -
Vimu5g02706 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 35 501 IPR020846 GO:0022857
Vimu5g02706 519 FunFam glucose-6-phosphate exchanger SLC37A2 isoform X1 298 502 - -
Vimu5g02706 519 FunFam Sugar phosphate exchanger 3 isoform 1 30 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02706 Vimu-Chr5 36875747 36877437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02706 15 515 Organic Solute Cotransporters AT3G47420 74.455 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02706 K13783 - gmx:100799211 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02706 5 36875747 36877437 Vimu5g02706 5 36875747 36877437 ECH