Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02702 ATGATGGCAAAGTCTTTGGTGGGGCCCATACCCATTCTTTTCCGCCCCCCTTACAGTCACACCACTAATTCACTAATCACACCCCTCCACTTTTCCTTCTCCGCCCGCCACGTCACCTTTTCCGCCGCACCCATGTCTACTCCCGCCACCGCCGCCACCACCATCCATCCCTCCTTCGAAATTCTCGGCGGCGCACACCACCGTTTCCTCCCAGCCCTCCCTCACTTGTCTCGCCCCTACCGCCCTTTCCCCCTCCTCGCCGCGAACCGTCACCTTGAAACGATATTCGCCGCCTTCTTCCGTTCCATCCCCGACGTCAGGCTCCGCCGGGAGTGCCTCCGGACCCATGAAGGCGGCGCTGTCGCCCTCGACTGGGTCGCCGGCGACGACCGCCGTTTGCCCCCTGACTCTCCCGTCTTAATCTTGCTGCCAGGTTTAACCGGAGGTAGTGAAGATTCGTATGTGAGACACATGTTGATTAGAGCTCGAAGCAATGGATGGCGTGTGGTGGTTTTCAACAGCCGTGGTTGTGGAGATAGCCCTGTTACTACTCCTCAGTTCTATTCGGCTTCGTTTTTGGGAGATATGCGTGAAGTTGTTTCTCATGTCACTGCTAGATACCCCAATGCTAATCTATATGGGGTTGGATGGTCTCTTGGAGCCAACATTCTTGTTCGTTACTTGGGTCAGGAGTCTCACAATTGTCCTCTTTCTGGCGCTGTATCATTGTGTAATCCTTTCAATTTAGTTGTGGCGGATGAGGACTTCCGAAAGGGCTTTAACATTATTTATGACAAGGCCCTTTCGAAGGCTCTTTGCAAGATTTTCAAGAAACATGCTTTACTCTTTGAAGACATGGGTGGTGAATATAATATTCCAATGGCAGCCAATGCCAAGTCTGTTAGGGAATTTGATGATGGACTGACCCGTGTTTCTTTTGGATTCAAGTCTGTGGATGAATACTACTCTAATTCAAGCAGTTCAGATTCCATAAAACATGTCAAAACTCCTTTGCTTTGCATTCAGGCGGCCAATGATCCGATTGCTCCTAATAGGGGAATTCCTCGTGAAGATATCAAGGAAAATCCAAACTGCTTGTTAGTAGTGACACCCAAAGGTGGCCATCTAGGGTGGGTTGCTGGTGATGAAGCTCCACTGGGAGCACCTTGGACTGATCCTTTGGTAATGGATTTTATTCAACATTTAGAGAGAGATGCAATTACTGCTCGAGAAACTAATTGTAATCCAGGAAGTAAAGAGGCCCTGTACCATCTTGAAGTGTAA 1284 0.4969 MMAKSLVGPIPILFRPPYSHTTNSLITPLHFSFSARHVTFSAAPMSTPATAATTIHPSFEILGGAHHRFLPALPHLSRPYRPFPLLAANRHLETIFAAFFRSIPDVRLRRECLRTHEGGAVALDWVAGDDRRLPPDSPVLILLPGLTGGSEDSYVRHMLIRARSNGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMREVVSHVTARYPNANLYGVGWSLGANILVRYLGQESHNCPLSGAVSLCNPFNLVVADEDFRKGFNIIYDKALSKALCKIFKKHALLFEDMGGEYNIPMAANAKSVREFDDGLTRVSFGFKSVDEYYSNSSSSDSIKHVKTPLLCIQAANDPIAPNRGIPREDIKENPNCLLVVTPKGGHLGWVAGDEAPLGAPWTDPLVMDFIQHLERDAITARETNCNPGSKEALYHLEV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02702 427 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 41 410 - -
Vimu5g02702 427 SUPERFAMILY alpha/beta-Hydrolases 102 385 IPR029058 -
Vimu5g02702 427 ProSitePatterns Uncharacterized protein family UPF0017 signature. 305 346 IPR000952 -
Vimu5g02702 427 FunFam Esterase/lipase/thioesterase family protein 114 386 - -
Vimu5g02702 427 Gene3D alpha/beta hydrolase 117 399 IPR029058 -
Vimu5g02702 427 Pfam alpha/beta hydrolase fold 138 376 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02702 Vimu-Chr5 36845670 36848146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02702 109 410 Miscellaneous Gene Families AT2G03140 31.908 5.72e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02702 - - gmx:100809859 715.687