Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02701 ATGGAAGAGGCAAAGGCATTGCAGCAGCAACATCAACAGCTTCTGTTGCAACAACAGCAACAACAACATCAACAAAATTTTCTGCTCTTACAGCAGTTGCAGAAACAGCAACATCAGCAACAGCAAGCAGCTGCAATTTCTCGTTTCCCTTCAAACATTGACGCTCACTTGCGACCTATCAGACCCCTCAATCTCCAACAAAACCCTAACCCTAACCCGAATCATCATCCCAACCCTAACCCTAATCCGATTATCAATTTGCATCAGAACCCTAATTCCAACCACCTTCCGCCCCAGCAGCCGCAACAGCCCCCACAACAGCAACAGCAACAGCAGCAGCAGAAGATTATTCGACCCGGGAACCAGATGGAGCTCCAGATGGCATACCAGGACGCGTGGCGGGTTTGCCATCCGGACTTCAAGCGTCCCTTTTCTTCCCTTGAAGATGCCTGCGAGAGATCCATACTGTCATTGAAGCTTTTGTACATAAATTTCTGGGGTGCCATGACAGTGCCGCATGGGATTTACTTGTTGATGGCTGAAAATGTTTTGCTTAAAGATGAGAAATTGAGCAGCAACCCTAGTCATCTGCTTGTGGCAAGGTGTCTCACTGGTCACAGGTTGGCCGAGCATATGTCTCACACTGGTCACAGGTTATTGCCTTACCATGTTGTGGCAGACTATGAGGAAGAAGAGGACGATAGGATACTTGATTCTGACACTACTGGCCAGATGCTTTCACGGTCACAGCAGTGGGATAATAATATTGCTGCTAAAATTGCTGAGTTCACTGCAACTTTTGAGAAACAAGCACTTGCCTTCAACATAATAACCCAAAAGAGAGGATTGGGGGAATTCCGGTCGGAGGAGAGATTGATGATCGAGCAGGCACTTCTCCAAGAAGAAAAAAGAGCTAATTATGAATTAAGAGCAGAGCTAGAGTCCAGGGAAAAGGCAGGCCGTGAAGCCCATGAGGCAAAACTACGGATGGCAGCAATGTTTCAAGCAGAACAGGCACGAGCTGATTTACAGTCTCATGCTGAAATGATGTCTCGAGCACCCATGAGAGGTAGTGCACTTGGTTCCCAAGGCAATGACATTGTGATTGGCCATGACATGGGAGAGCAAGATCAGGGAGGTAACCCTGGTGAGATGATTAATGGATGGGGAAACAACACTCAGAGAGATGAGAAGGAGCCATCAGAGGATTTCTTGAATGATGAAGCTGAAAATGGAGACACTGGAACCCAAGATGGCTGGCGTGAAGTTGGTGAATTTGATTTGAATGCTAGGTGA 1296 0.4715 MEEAKALQQQHQQLLLQQQQQQHQQNFLLLQQLQKQQHQQQQAAAISRFPSNIDAHLRPIRPLNLQQNPNPNPNHHPNPNPNPIINLHQNPNSNHLPPQQPQQPPQQQQQQQQQKIIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERSILSLKLLYINFWGAMTVPHGIYLLMAENVLLKDEKLSSNPSHLLVARCLTGHRLAEHMSHTGHRLLPYHVVADYEEEEDDRILDSDTTGQMLSRSQQWDNNIAAKIAEFTATFEKQALAFNIITQKRGLGEFRSEERLMIEQALLQEEKRANYELRAELESREKAGREAHEAKLRMAAMFQAEQARADLQSHAEMMSRAPMRGSALGSQGNDIVIGHDMGEQDQGGNPGEMINGWGNNTQRDEKEPSEDFLNDEAENGDTGTQDGWREVGEFDLNAR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02701 431 Coils Coil 1 36 - -
Vimu5g02701 431 MobiDBLite consensus disorder prediction 81 96 - -
Vimu5g02701 431 MobiDBLite consensus disorder prediction 62 116 - -
Vimu5g02701 431 Coils Coil 299 319 - -
Vimu5g02701 431 MobiDBLite consensus disorder prediction 375 431 - -
Vimu5g02701 431 Pfam Conserved region of unknown function on GLTSCR protein 216 310 IPR015671 -
Vimu5g02701 431 PANTHER GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 119 154 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02701 - - gmx:100793492 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02701 5 36838943 36843340 Vimu5g02701 5 36838943 36843340 ECH