Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02698 ATGGCAGTGGAAGAGCATGAGAAGGAGAAGCTGCAGAAGGGAATCGCTGAGTTCTACGACGAGTCGTCTACCATATGGGAGAACATTTGGGGCGACCACATGCACCATGGCTTCTACGACCCGGATTCTACCGTTTCGGTTTCGGATCATCGTGCTGCTCAGATCCGAATGATCGAAGAGTCGCTCCGTTTCGCCTTGCTTTCTGAGGAGCGTACGAAATGGCCGAAGAGAATAGTTGATGTTGGATGTGGCATAGGGGGCAGTTCCAGATACTTGGCCGAGAAATTTGGGGCAACCAGCGTTGGCATCACTCTCAGTCCTGTTCAAGCTGAAAGAGCTAATGCTCTTGCTGCAGCTCAAGGATTGGCTCACAAGGTTTCTTTTCAGGTTGCTGACGCTCTGCAGCAACCATTCCCTGATGGACAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAACTAAGTTTGTTGGAGAGTTGGCTCGGGTAGCAGCACCAGGTGGCACCATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGACGAACAATCCCTAAAACCATGGGAGCAAGATCTGTTGAAGAAGATTTGTGATGCATTTTATCTTCCAGCCTGGTGCTCAGCTGCTGATTACATCAAATTGCTTAAATCACTGTCACTTCAGGATATTAAGTCAGCAGATTGGTCTCCCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGTTCTGCATTAACATGGAATGGCCTCGCTTCACTTTTGCGCAGTGGAGTGAAAACCATTAAAGGAGCTTTGGCTATGCCATTGATGATAAAAGGATACAAGAAGGGTTTGATTAAGTTTGTGATCATTACATGTAGAAAGTCTGGATAA 891 0.4736 MAVEEHEKEKLQKGIAEFYDESSTIWENIWGDHMHHGFYDPDSTVSVSDHRAAQIRMIEESLRFALLSEERTKWPKRIVDVGCGIGGSSRYLAEKFGATSVGITLSPVQAERANALAAAQGLAHKVSFQVADALQQPFPDGQFDLVWSMESGEHMPDKTKFVGELARVAAPGGTIIIVTWCHRDLGPDEQSLKPWEQDLLKKICDAFYLPAWCSAADYIKLLKSLSLQDIKSADWSPFVAPFWPAVIRSALTWNGLASLLRSGVKTIKGALAMPLMIKGYKKGLIKFVIITCRKSG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02698 296 CDD AdoMet_MTases 77 180 - -
Vimu5g02698 296 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 294 IPR029063 -
Vimu5g02698 296 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 1 296 IPR025774 GO:0008168|GO:0032259
Vimu5g02698 296 Pfam Methyltransferase domain 79 177 IPR013216 GO:0008168
Vimu5g02698 296 Gene3D Vaccinia Virus protein VP39 20 294 IPR029063 -
Vimu5g02698 296 PANTHER METHYLTRANSFERASE 20 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02698 Vimu-Chr5 36821824 36825665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02698 76 187 Acyl Lipid Metabolism Gene Families AT1G73600 36.607 5.01e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02698 K05928 - gmx:100792443 528.094