Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02695 ATGGATAGAGATGGAAACTCAAGCGGGACGGGGAACAACGCGCCAACGGAATTCACCCCATGGGAAGGTGAGGACCTCCCACTAATGGAGGTCCAAGGGTTTGACATGAGAAACGGGTCACCCGAATCCGCGTGCAGGCTTCTGGTGAGGCTCCCGATGGCACAGGGGTATCACTGGGTGCCTGTGCAGGGCATGCCACCTGAGGCAGCCATGTCGCACATTGACGCCTTCATCAAGAGCCAGCACATGCAGCTGATGGCACACCCCCCCGCCGGCTGGACCCCAGATAGGATCAAGAAGATTGCCATCTGCCTGGGGATCTCTCGTGCGGTCGCCACCGCCAACCACAGGATCCAGCTATCTGATATCATTCCAGAAGAAAGGGCCAGCCCAGTATTCAACTATAGGCCGCTCGCGGCCGGGGCAACGAAAGGGACAACCGAAATAGTCCCGGGGCTGAGCGATGAGGAGAGGGCGTTCGCTGCCCTGCCCATGGAGTACACTGACGAGGAGAAGGCTGCCATGGCTGTGCTTATGAGATGCTCTCTAGCGACGATCCCCCTGCAGGGATACTCCTTGGTTGTGTGCGGGCAACACTACCTGAGCGACAAGGGGACGCGGTCGCGCAAGGCTTTCGCTGCGGTGGAGAGGCAATTCTGGGGCGAACCTGCTATCAAGGACTGGCTAGGCGCTGACATCGAGCAGATACAGGATGCCATGTGGCTCAAGGCTACCCACCCGGTGAACGTGACAGTTAAGTACGGAGCGTGCACAAGCCAGGAGCTCAAAGTGCAGCTAGTGACTGCGGGAGTGGGCTTGGCAGCGGCCTGGTTGCCTGCTATGGAACCAGAGGTCCGTGCAGGGACGTGTTACATCGCGCTCTTCGACGTTTTGAGACCCTTGTTCCAGATGTTCGGAGGGGTTGTGAAGACCGACCTACTCGAGCTGGCGGTGGCCACCGTGCAGGCATACCCCTTCGGAACGGAGAACCCCAGAGAGCTACAGAACAGGGACAAGAGGATCCCACTGAACGTGGTGAACAGGAGGACTGCAGTACACTGGGTCAGCTCGCTGGTCAATCGAAACGCGAAAATCGCTGCGGAGTGCTATGGCTTCTACATTGCCATGTCCGACAGGACCCAGATGTCGACAGCTGGTGGAGGCTTCGACACCCTGAGGTGCCAGTTGTCGCTCAAAAAGCTGGCCACAAACCAGTTCCCTGCATACAGGGCCGGTTACGAGAAGTATGGCGACTATGCTGCTGATGTTGCCAGGGCAAGAAGCAGGGGTGGTGACGCCAGACAGGCCATGTCGTGTTCGTGCGTTTCGAAAGTGGTGTCAGCTTTTAACTCGTGCGGTGAGATGGCGAATTTCAAGGTTTTCGTTGGGTATGATCCACGCGAAGACATTGCTTACGAGGTTTGTCGCCACTCAATCTTGAAGAAAGCTTCGATCCCAGTTGAAATCATACCGATCAAGCAATCAGAATTGAGAAAAAATGGGTTGTATTGGCGTGAAAAGGACCAGTACGAGAGCACGGAATTCTCGTTTTCGAGGTTCTTGACTCCAAAATTGGCCAACTACGAAGGCTGGGCAATGTTCGTGGACTGTGATTTCCTCTACCTTGCAGATATAAAAGAGCTGAGAGATTTGATCGATGAGAAGTATGCTGTGATGTGTGTCCAACATGAATATGTTCCAAAGGAGGCAACGAAAATGGATGGGGCAGTGCAAACAGTGTACCCCAGAAAGAATTGGTCTTCGATGGTGTTATACAATTGTGGGCATCCGAAGAACAGTGTTCTGACTCCTGAAGCTGTGAACACGGAAACTGGAGCTTTTCTTCACAGGTTTCAGTGGCTGCAAGATGATGAAATTGGGTCGATTCCTTTTGTTTGGAATTTCCTTGAGGGGCATAACAAGGTTGTCGAGAATGATCCTAGCACTTTTCCTAAGGCTATTCATTATACTCGCGGAGGACCATGGTTTGAAGCTTGGAAGAATTGTGCTTTCGCTGACCTCTGGCTGAAAGAAAGGGATGAGTACCAGAACGACGCCAAAAAAGCTATCACAAATTAA 2079 0.5349 MDRDGNSSGTGNNAPTEFTPWEGEDLPLMEVQGFDMRNGSPESACRLLVRLPMAQGYHWVPVQGMPPEAAMSHIDAFIKSQHMQLMAHPPAGWTPDRIKKIAICLGISRAVATANHRIQLSDIIPEERASPVFNYRPLAAGATKGTTEIVPGLSDEERAFAALPMEYTDEEKAAMAVLMRCSLATIPLQGYSLVVCGQHYLSDKGTRSRKAFAAVERQFWGEPAIKDWLGADIEQIQDAMWLKATHPVNVTVKYGACTSQELKVQLVTAGVGLAAAWLPAMEPEVRAGTCYIALFDVLRPLFQMFGGVVKTDLLELAVATVQAYPFGTENPRELQNRDKRIPLNVVNRRTAVHWVSSLVNRNAKIAAECYGFYIAMSDRTQMSTAGGGFDTLRCQLSLKKLATNQFPAYRAGYEKYGDYAADVARARSRGGDARQAMSCSCVSKVVSAFNSCGEMANFKVFVGYDPREDIAYEVCRHSILKKASIPVEIIPIKQSELRKNGLYWREKDQYESTEFSFSRFLTPKLANYEGWAMFVDCDFLYLADIKELRDLIDEKYAVMCVQHEYVPKEATKMDGAVQTVYPRKNWSSMVLYNCGHPKNSVLTPEAVNTETGAFLHRFQWLQDDEIGSIPFVWNFLEGHNKVVENDPSTFPKAIHYTRGGPWFEAWKNCAFADLWLKERDEYQNDAKKAITN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02695 692 SUPERFAMILY Nucleotide-diphospho-sugar transferases 460 682 IPR029044 -
Vimu5g02695 692 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 445 689 IPR029044 -
Vimu5g02695 692 PANTHER EXPRESSED PROTEIN 453 689 - -
Vimu5g02695 692 MobiDBLite consensus disorder prediction 1 17 - -
Vimu5g02695 692 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02695 Vimu-Chr5 36801934 36806773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02695 - - var:108339586 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02695 5 36801934 36806773 Vimu5g02695 5 36801934 36806773 ECH