Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02683 ATGGGACTATATAAAAGGGAAGCTCTGAATCTTTCATGGTTACCATTCAATCTTCTGTTCCTCTTCCGGGCTCAATCAAATTCATATCCTGAAAATATGGTGGCCGAAAGAGAAAGAGAGGTTAACGGTAACGGCGACGGAGAGAGAACGTTAATATTCACCTACGGAACCCTCAAGAGAGGATTCTCCAACCACCCGCTTCTTCAAGACCTCATCCGCGCCGGCGACGCTTCCTTCGTCGGAACCTATCGCACCGCCGGAAAATACCCTCTTGTATGCGGGCCATACCGGGTCCCTTTCCTCCTCAATATTCCCGGGTCGGGTTGTTGGGTCCACGGGGAGCTCTACTCTGTCTCCACGCGTGGCCTCGTTCGGATGGACGAACTGGAGGGGACATCACGCGCCCACTACGAGCGTCTCCCAATAAAGGTGGTTACGGCGGGGGAGGGCGAGGAGGAGGAGGGGAAGGAGGCGGAGGGGGAGACGGTGGTGGGGGTAACGTGCGCGGAGGCGTATTATGCACACAGGAATTACGGGATGGAGATGTGGAAGAAGAACGGGAAGCGAGGGCTGAGATGTTATTCGCAGAAAGAGACGATTGGTTATGTGAAACGCAAGGATCGGCCTCAAAATTTGACCTTTCTCGATCATATTCGCTTTTTCCTTGCCTCAAATTAG 678 0.5324 MGLYKREALNLSWLPFNLLFLFRAQSNSYPENMVAEREREVNGNGDGERTLIFTYGTLKRGFSNHPLLQDLIRAGDASFVGTYRTAGKYPLVCGPYRVPFLLNIPGSGCWVHGELYSVSTRGLVRMDELEGTSRAHYERLPIKVVTAGEGEEEEGKEAEGETVVGVTCAEAYYAHRNYGMEMWKKNGKRGLRCYSQKETIGYVKRKDRPQNLTFLDHIRFFLASN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02683 225 CDD GGCT_like 52 146 IPR013024 -
Vimu5g02683 225 PANTHER TROPONIN C-AKIN-1 PROTEIN 50 224 IPR039126 GO:0061929
Vimu5g02683 225 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 52 173 IPR009288 -
Vimu5g02683 225 FunFam Putative gamma-glutamylcyclotransferase 40 208 - -
Vimu5g02683 225 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 50 153 IPR036568 -
Vimu5g02683 225 Gene3D - 41 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02683 Vimu-Chr5 36711195 36712599 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02683 K19761 - gmx:100802936 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02683 5 36711195 36712599 Vimu5g02683 5 36711195 36712599 ECH