Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02674 ATGGCTTCAAAATCTAGGGCTGTTTCTTTTGGGGGAATTGTTATTGCTGGCTGCTTGATGAGACCCAATCTATCTGAAAATCCCAGCAAAGGATCAATGGGAACTACTAGAATCAGTAAAGCTAGCAAAGTAGTGTCCAAATCAGAATCCGAGTCACAAGCCCCTTTGCAAAATTCGCGACTTTCTGTGGAACGATCTCCACGATCTGTTAATTCAAAGCCAACGATTGAGCGCAAATCACCAAGACCTTCCGCCACCCCACCTGATAAACAACCCCCTAGAGCTGCAAAGGGTTCAGAGTTGTTGCAGAACCAATTGAATCTTGCTCAAGAAGACCTAAAGAAAGCAAAGGAGCTGCTCATTCAGGCTGAGAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAAGAAGCACAGAGGGTGGCTGAGGAAGCAAATGACAAACTCAGGGAAGCATTGGTGGCTCAAAAACGCGCCGAGGAGAATTCTGAGATTGAGAGGTTCCGAGCTGTGGAATTGGAGCAGGCCGGTATTGAAACTGTGAAGAAGAAGGAAGAAGAATGGAAGAAGGAGATTGAAAGTGTAAGGAACCAACATGCTTTGGACATGGCAGCTCTTCTCTCCACCACGCAGGAGCTTCAGCGGGTTAAACAAGAACTTGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCCGACGATGCAACTAAAATTGCCGAGATTCAGGCAGAGAAAGCAGAGTTTTTATCAGCTGAATTGGTGCGATTGAAGGCCTTACTAGATGCAAAACTGGAAACGGAGGCTGGAGAAAATCAGGTTATATTGAAACTGAAAACCGAGATAGAGGCTCTCAATGAAGAACTTGAAAAAGCAAAGGGTTACGCTGATAAGCTGTCAGAGAAAGAAGCTTTAATTGAACAGCTTAATGTGGAGCTTGAAGCTTCAAAAATGGCGGAGTCTTATTCCCGTAGCCTGCTAGAGGAGTGGCATAAGAAGGTTGAGGAACTGGAAATGCGAATTGAAGAAGCAAACAGACTGGAGAGATCTGCATCAGAGTCTTTGGAATCTGTAATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCACGAAGCAGAATCTGAAGTTACAACTCTTAAAGAGAAGGTGGGGTTATTAGAAATGACAATTGGGAGACACAGAGCTGATGTTGAGGATTCAGAGCGTCAACTTCGTACGGCCAAGGAAGAAAGTCTTGAGAAGTCAAAGGAAGTTGAGGCTCTGAAATCTGAAATTGAGAAGGTTAAGGAAGAGAAAGCTCAAGCTTTGAACGATGAAAAACTTGCCGCTTCTAGTGTGCAGACCTTATTAGAAGAGAAAAACAAACTTATCAGTGAGTTGGAAAATTCTAGAGATGAAGAAGAAAAGAGCAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCCAGAGAAGCTAAGGAAAATCTACTAAACATCCAAGCTGAACGTGAAAGCTATGAGGCTCAGATTGAAGATTTGAAGTTAGTATTAAAAGCCACTAATGAAAAATATGAGTCCATGCTAGATGAGGCACGACATGAAATCGATGTTCTTGTATGTAGCATTGAAAATTCAAAGAGTGTCTTTGAGAACTCCAAGGTTGAGTGGGAGCAGAGAGAGCATCATCTTGTGAGCTGCATAAAGAAAAATGAAGAAGAGAAGGTATCTCTGGAAAAAGAAATAAAAAGATTGCTTTATTTGCTTAAAGAAACCGAGGAAGAAGCTAATATAAACAGGGAAGAAGAAGCCCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCAATTCAACTGCAGGAAGCTCTTAAGGAAGCAACAGCTGAGAACATGAAATTGAAGGAGAATTTATTGGACAAAGAAAACGAGTTGCAGAGTATGTTTGAAGAAAATGATGAACTTCGGATGAGGGAATCTGAATCAATGAAGAAGGTGGAGGAGTTATCGAAGTTGTTGGAAGAAGCTACAACCATAAACCACACTGAGGAAAACGGGGATCTTACAGACAGTGAGAAAGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGACATGTAGGAGATGACATTTCAAAGGTAGAGCGCTCAGCGAATCAGGAGGAACTCAAACAAAACATACCAGAAGAAAGCATAGACAAGGCTGAAAACATTGCATCTCCAAAACCTGAGGAAGTAGAGAGTGAAAAAGTGAAGGAAGAAGATGAGAGGAAAGAAAAGGAGGATTCAGTAGAAGTTGAATTTAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCTCCAGAGAGAGAAGCAGAGCCTGAATCATTTGAAGATGAAGTTGACTCAAAGGTAGAAGAAGGTGGTGAGAGTTTTGATAAGATAAATGGAAATTCAGTGACAGAGAACATTGATGAAGGTTTGACAGAGAACATGGAAATTCAGTTAAAACAACAATCAAAGAAGAAGAAAAAGGCTTTACTTGGTAAGTTTGGAAGCCTGTTAAAGAAAAAGGGTGGTGCCAACCAGAAATAG 2586 0.4134 MASKSRAVSFGGIVIAGCLMRPNLSENPSKGSMGTTRISKASKVVSKSESESQAPLQNSRLSVERSPRSVNSKPTIERKSPRPSATPPDKQPPRAAKGSELLQNQLNLAQEDLKKAKELLIQAEKEKLKAIDELKEAQRVAEEANDKLREALVAQKRAEENSEIERFRAVELEQAGIETVKKKEEEWKKEIESVRNQHALDMAALLSTTQELQRVKQELAMTCDAKNQALNHADDATKIAEIQAEKAEFLSAELVRLKALLDAKLETEAGENQVILKLKTEIEALNEELEKAKGYADKLSEKEALIEQLNVELEASKMAESYSRSLLEEWHKKVEELEMRIEEANRLERSASESLESVMKQLEGSNDLLHEAESEVTTLKEKVGLLEMTIGRHRADVEDSERQLRTAKEESLEKSKEVEALKSEIEKVKEEKAQALNDEKLAASSVQTLLEEKNKLISELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNIQAERESYEAQIEDLKLVLKATNEKYESMLDEARHEIDVLVCSIENSKSVFENSKVEWEQREHHLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANINREEEAQLKENLKEVEAEAIQLQEALKEATAENMKLKENLLDKENELQSMFEENDELRMRESESMKKVEELSKLLEEATTINHTEENGDLTDSEKDYDLLPKVVEFSEENGHVGDDISKVERSANQEELKQNIPEESIDKAENIASPKPEEVESEKVKEEDERKEKEDSVEVEFKMWESCKIEKKEFSPEREAEPESFEDEVDSKVEEGGESFDKINGNSVTENIDEGLTENMEIQLKQQSKKKKKALLGKFGSLLKKKGGANQK 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02674 861 MobiDBLite consensus disorder prediction 789 803 - -
Vimu5g02674 861 Coils Coil 566 656 - -
Vimu5g02674 861 Coils Coil 327 438 - -
Vimu5g02674 861 MobiDBLite consensus disorder prediction 780 817 - -
Vimu5g02674 861 Coils Coil 275 319 - -
Vimu5g02674 861 Coils Coil 443 533 - -
Vimu5g02674 861 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 36 857 - -
Vimu5g02674 861 MobiDBLite consensus disorder prediction 19 99 - -
Vimu5g02674 861 Pfam Weak chloroplast movement under blue light 100 381 IPR008545 -
Vimu5g02674 861 MobiDBLite consensus disorder prediction 703 766 - -
Vimu5g02674 861 Coils Coil 99 161 - -
Vimu5g02674 861 Coils Coil 177 197 - -
Vimu5g02674 861 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vimu5g02674 861 MobiDBLite consensus disorder prediction 395 417 - -
Vimu5g02674 861 MobiDBLite consensus disorder prediction 25 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02674 Vimu-Chr5 36652467 36655707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02674 - - gmx:100777446 1283.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02674 5 36652467 36655707 Vimu5g02674 5 36652467 36655707 ECH